| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0964 |
|---|
| Symbol | |
|---|
| ID | 8380141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1020593 |
|---|
| End bp | 1021408 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645003705 |
|---|
| Product | F420-dependent oxidoreductase |
|---|
| Protein accession | YP_003160923 |
|---|
| Protein GI | 256832196 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1478] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01916] F420-0:gamma-glutamyl ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATG ACGGGGCCGG CAAGCAGGGG GTGAGTGCCG CACTGCAGGT GTGGGCCGTG
CACGGAGTTC CCGAGGTGAC GCCAGGAATG AGCGTAGCTG AGCTGGTAGC TCAGTATGCT
GGTGCGCTCC ACGACGGTGA TGTGGTGGTG GTGACCTCAA AGATCGTGTC CAAAGCAGAA
GGACGTGTCG TCCGGGCGGA TGATCGGGAG GCTGCGATCA CAAGTCAGAC TGTGCGCGAA
GTGGCGCGCC GCGATCGAGT GGACGGACCA CCGCTGCGCA TTGTTGAAAA CCCACTGGGG
TTAGTGATGG CTGCAGCAGG TGTCGATTCC TCCAACACGA GCGAGGGGAC GGTGCTGTTG
TTGCCCGAGG ACCCTGATTA TTCCGCCCGA CAGATCCGTG AGTTTCTGTG GGAAAAACGG
ACAGTCAACG TCGCCGTCAT TGTGTCAGAT ACGGTGGGGC GACCGTGGCG CAGTGGGCAA
ACTGATATCG CCATCGGTGT TGCTGGGATG CAACCTTGGC GAGACTACCG TGGGCAAGTG
GATCAAGCGG GACGTGCGTT GCACGTGACG ATGAGCGTGA TTGTGGATGA GTTGGCTGCT
GCCAGCGATG TGGTGCGCGG AAAGAATAAT GGCCGTCCGC TCGCTGTGGT CCGAGGTGTG
AGTGAGGATG TGTTGCCGCC GGGAGACCAC GGCCCCGGTG CACGGTCGTT AGTGCGTCTT
GGCGAGGATG ATTTGTTTGC TCGGGGAAGC AAAGAGGCCT TTGATGAGGG TTTCGCTGCT
GGGCTTCGAG CCCGTGAGCG TCGCGCTCCA CAGTGA
|
|---|
| Protein sequence | MIHDGAGKQG VSAALQVWAV HGVPEVTPGM SVAELVAQYA GALHDGDVVV VTSKIVSKAE
GRVVRADDRE AAITSQTVRE VARRDRVDGP PLRIVENPLG LVMAAAGVDS SNTSEGTVLL
LPEDPDYSAR QIREFLWEKR TVNVAVIVSD TVGRPWRSGQ TDIAIGVAGM QPWRDYRGQV
DQAGRALHVT MSVIVDELAA ASDVVRGKNN GRPLAVVRGV SEDVLPPGDH GPGARSLVRL
GEDDLFARGS KEAFDEGFAA GLRARERRAP Q
|
|---|
| |