Gene Jden_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0962 
Symbol 
ID8380139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1015866 
End bp1017680 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content56% 
IMG OID645003703 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003160921 
Protein GI256832194 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.182465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAT CATCAGTGCC CGATCGGTGC GATTACCCTC CCGAAGCGTC AATCAACACC 
TTGCTTGCTG ACCGTGTCCA GCGAGCAGGT GGTAAGACAC TCTTCGAACG GCAAACCGCT
CTGGCCTCCG GCTGGGTACC AGTCACCGCG CAACAGTTCG CCGACCAAGT CATGGCGACA
GCGCGCGGAC TTATCGCCTC AGGTGTCGCA GTAGGCGACC GAATCGCCAT CATGTCTCGC
ACACGTTACG AATGGACTCT CCTTGACTTT GCGGCCTGGG CTATCGGGGC CGTGCCGGTT
CCCGTGTATG AGACATCCTC TGCAAAACAA CTGCAATGGA TTTGCTCTGA TGCTGGCGTC
AACATCCTCA TTGTGGAAAA CTCCGCCCAC CTGGCGGTCG CTCAGGAAGC AGCGCGCGAT
CTTCCTGATC TGCGTGAGGT TCTCGTCCTT GATGACGACG CGTTGTCAAC GCTTGCTACC
CGTGGCGCAA ACACGGACCC GCACGAAGTC ACACAGCGTT CTGTCGCGGT CACCGGGGGC
GACCTAGCCA CCATCATTTA CACCTCCGGC ACCACAGGGC GCCCCAAAGG TGTGGAACTT
ACTCACCGAA GCTTTGTGTT CCTGACCCGC AACGGAATTG CTGACCTGGG ACACGTGTGT
GCGCCAGGAA AGCGCACCCT CCTCTTCATG CCGCTGGCAC ATGTCTTTGC CCGATTTATC
CAGGTGTTGT GCGTGACCTC AGGTGCGGTC ATGGGGCATA CACCCGATGC TCGAAACCTC
ATCCCTGATC TCGCCTCGTT CCGTCCTACC TTCCTTCTGG CGGTTCCACG AGTATTTGAG
AAGGTGTACA ACTCAGCTGA ACAAAAAGCG GGTCCCCGCA AACTCAAACT GTTTCGCTGG
GCTGCGAAAG TGGCAATCCA GTATTCACGA GCAAGTGAAC GCCAAGAAGG CCCCTCAGCA
ATCCTCAAAG CACAGCACGC GATTGCATCC GCTCTTGTAT TTTCAAAATT GCGGGCTTTG
TTAGGTGGGC AAGCCGAATA CGCCATCTCT GGTGGTGCAC CGTTGGGTGA ACGACTCGGT
CACTTCTATC GCGGCATTGG TCTGACAATC CTGGAAGGGT ACGGCCTCAC AGAAACATGC
GCACCCACAA CGGTGAATCG CCCTCATCTC GTGAAAATCG GGACTGTCGG GCTGCCTTTC
CCCGGTGCAT CAGTGAAAAT CGCGGACGAC CACGAGATCC TAATCAAAGG TGACCACCTT
TTCCGTGGCT ATCGGAATAA CCCTCAGGCT ACAGCTGAGG CCCTGAAAGA TGGGTGGTTC
CACACCGGCG ACTTGGGCAC ATTAGACGAC GACGGTTACC TTCGGATCAC CGGCCGCAAG
AAAGAAATTA TCGTCACCGC TGGAGGGAAG AACGTTGCTC CAGCGGTCCT TGAGGACCGG
TTACGTGGCC ACCCTATTGT GTCGCAAGTC GTTGTCGTTG GTGATCAACG CCCATTCATT
GGTGCGTTGA TCACTCTGGA CACCGATATG CTTCCTGGCT GGCTGCGATC GCACAACCTG
CCCCCCATGG ACGTGACGAC GGCATCGACA GATGAACAAG TCCTTGCTGC CCTTGACCGT
GCCGTCACCC GCGCAAACGA GGCAGTTTCT CGGGCTGAGT CCATCCGAAA GTTCACCGTT
CTCACCACAG ACTTCACTGA ATCGAACGGA TACCTTACTC CGTCCATGAA AGTAAAACGC
GCTCAAGTCC TCAAGGACTT CTCCTTAACC ATTGACGAAC TCTACGGTGG GCCGGTGTCC
CAGAACGACG AGTAA
 
Protein sequence
MNESSVPDRC DYPPEASINT LLADRVQRAG GKTLFERQTA LASGWVPVTA QQFADQVMAT 
ARGLIASGVA VGDRIAIMSR TRYEWTLLDF AAWAIGAVPV PVYETSSAKQ LQWICSDAGV
NILIVENSAH LAVAQEAARD LPDLREVLVL DDDALSTLAT RGANTDPHEV TQRSVAVTGG
DLATIIYTSG TTGRPKGVEL THRSFVFLTR NGIADLGHVC APGKRTLLFM PLAHVFARFI
QVLCVTSGAV MGHTPDARNL IPDLASFRPT FLLAVPRVFE KVYNSAEQKA GPRKLKLFRW
AAKVAIQYSR ASERQEGPSA ILKAQHAIAS ALVFSKLRAL LGGQAEYAIS GGAPLGERLG
HFYRGIGLTI LEGYGLTETC APTTVNRPHL VKIGTVGLPF PGASVKIADD HEILIKGDHL
FRGYRNNPQA TAEALKDGWF HTGDLGTLDD DGYLRITGRK KEIIVTAGGK NVAPAVLEDR
LRGHPIVSQV VVVGDQRPFI GALITLDTDM LPGWLRSHNL PPMDVTTAST DEQVLAALDR
AVTRANEAVS RAESIRKFTV LTTDFTESNG YLTPSMKVKR AQVLKDFSLT IDELYGGPVS
QNDE