Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0962 |
Symbol | |
ID | 8380139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1015866 |
End bp | 1017680 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003703 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003160921 |
Protein GI | 256832194 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.182465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAT CATCAGTGCC CGATCGGTGC GATTACCCTC CCGAAGCGTC AATCAACACC TTGCTTGCTG ACCGTGTCCA GCGAGCAGGT GGTAAGACAC TCTTCGAACG GCAAACCGCT CTGGCCTCCG GCTGGGTACC AGTCACCGCG CAACAGTTCG CCGACCAAGT CATGGCGACA GCGCGCGGAC TTATCGCCTC AGGTGTCGCA GTAGGCGACC GAATCGCCAT CATGTCTCGC ACACGTTACG AATGGACTCT CCTTGACTTT GCGGCCTGGG CTATCGGGGC CGTGCCGGTT CCCGTGTATG AGACATCCTC TGCAAAACAA CTGCAATGGA TTTGCTCTGA TGCTGGCGTC AACATCCTCA TTGTGGAAAA CTCCGCCCAC CTGGCGGTCG CTCAGGAAGC AGCGCGCGAT CTTCCTGATC TGCGTGAGGT TCTCGTCCTT GATGACGACG CGTTGTCAAC GCTTGCTACC CGTGGCGCAA ACACGGACCC GCACGAAGTC ACACAGCGTT CTGTCGCGGT CACCGGGGGC GACCTAGCCA CCATCATTTA CACCTCCGGC ACCACAGGGC GCCCCAAAGG TGTGGAACTT ACTCACCGAA GCTTTGTGTT CCTGACCCGC AACGGAATTG CTGACCTGGG ACACGTGTGT GCGCCAGGAA AGCGCACCCT CCTCTTCATG CCGCTGGCAC ATGTCTTTGC CCGATTTATC CAGGTGTTGT GCGTGACCTC AGGTGCGGTC ATGGGGCATA CACCCGATGC TCGAAACCTC ATCCCTGATC TCGCCTCGTT CCGTCCTACC TTCCTTCTGG CGGTTCCACG AGTATTTGAG AAGGTGTACA ACTCAGCTGA ACAAAAAGCG GGTCCCCGCA AACTCAAACT GTTTCGCTGG GCTGCGAAAG TGGCAATCCA GTATTCACGA GCAAGTGAAC GCCAAGAAGG CCCCTCAGCA ATCCTCAAAG CACAGCACGC GATTGCATCC GCTCTTGTAT TTTCAAAATT GCGGGCTTTG TTAGGTGGGC AAGCCGAATA CGCCATCTCT GGTGGTGCAC CGTTGGGTGA ACGACTCGGT CACTTCTATC GCGGCATTGG TCTGACAATC CTGGAAGGGT ACGGCCTCAC AGAAACATGC GCACCCACAA CGGTGAATCG CCCTCATCTC GTGAAAATCG GGACTGTCGG GCTGCCTTTC CCCGGTGCAT CAGTGAAAAT CGCGGACGAC CACGAGATCC TAATCAAAGG TGACCACCTT TTCCGTGGCT ATCGGAATAA CCCTCAGGCT ACAGCTGAGG CCCTGAAAGA TGGGTGGTTC CACACCGGCG ACTTGGGCAC ATTAGACGAC GACGGTTACC TTCGGATCAC CGGCCGCAAG AAAGAAATTA TCGTCACCGC TGGAGGGAAG AACGTTGCTC CAGCGGTCCT TGAGGACCGG TTACGTGGCC ACCCTATTGT GTCGCAAGTC GTTGTCGTTG GTGATCAACG CCCATTCATT GGTGCGTTGA TCACTCTGGA CACCGATATG CTTCCTGGCT GGCTGCGATC GCACAACCTG CCCCCCATGG ACGTGACGAC GGCATCGACA GATGAACAAG TCCTTGCTGC CCTTGACCGT GCCGTCACCC GCGCAAACGA GGCAGTTTCT CGGGCTGAGT CCATCCGAAA GTTCACCGTT CTCACCACAG ACTTCACTGA ATCGAACGGA TACCTTACTC CGTCCATGAA AGTAAAACGC GCTCAAGTCC TCAAGGACTT CTCCTTAACC ATTGACGAAC TCTACGGTGG GCCGGTGTCC CAGAACGACG AGTAA
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Protein sequence | MNESSVPDRC DYPPEASINT LLADRVQRAG GKTLFERQTA LASGWVPVTA QQFADQVMAT ARGLIASGVA VGDRIAIMSR TRYEWTLLDF AAWAIGAVPV PVYETSSAKQ LQWICSDAGV NILIVENSAH LAVAQEAARD LPDLREVLVL DDDALSTLAT RGANTDPHEV TQRSVAVTGG DLATIIYTSG TTGRPKGVEL THRSFVFLTR NGIADLGHVC APGKRTLLFM PLAHVFARFI QVLCVTSGAV MGHTPDARNL IPDLASFRPT FLLAVPRVFE KVYNSAEQKA GPRKLKLFRW AAKVAIQYSR ASERQEGPSA ILKAQHAIAS ALVFSKLRAL LGGQAEYAIS GGAPLGERLG HFYRGIGLTI LEGYGLTETC APTTVNRPHL VKIGTVGLPF PGASVKIADD HEILIKGDHL FRGYRNNPQA TAEALKDGWF HTGDLGTLDD DGYLRITGRK KEIIVTAGGK NVAPAVLEDR LRGHPIVSQV VVVGDQRPFI GALITLDTDM LPGWLRSHNL PPMDVTTAST DEQVLAALDR AVTRANEAVS RAESIRKFTV LTTDFTESNG YLTPSMKVKR AQVLKDFSLT IDELYGGPVS QNDE
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