| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0954 |
|---|
| Symbol | tig |
|---|
| ID | 8380131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1008503 |
|---|
| End bp | 1009870 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003695 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_003160913 |
|---|
| Protein GI | 256832186 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.928041 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGCA CCGTCGAGAC CCTAGACCCG ACCAAGGCCA AGCTGACGGT CGAGGTGGAG
TACGACGAGC TCCAGCCAGC GATCGAGCAC GCCTACACCC ACATTGCTCA GGACATCACC
ATTCCTGGGT TCCGCAAGGG CAAGGTGCCG CCACGCATCA TTGACCAGCG CATCGGACGC
GCAGCAGTGC TGGAGCACGC AGTCAACGAA GCCCTCCCAG GCTTCTACCG CGACGCACTC
GCGCAGTCAG AGTTGCGGCC GTTGGGGCAA CCGTCCGTTG AGGTCACCAA GGTTCCTCTT
GGCGACGACG AGCAGGGAAA CCTCGAATTC GTGGTCGAGC TTGAAGTTCG CCCAGACTTC
GACCTGCCAG AGCTTGACGG CTTGAGCCTC CAAGTCCCTA ACGTCACCGT GTCCGACGAG
GACGTAGAAG AGCGTCTGAC ATCGCTTCGC GAGCGTTTCG GTACCCTGGT GGGCGTTGAC
CGTCCTGCTG CTGACGGTGA CTTCGTCGTC ATTGACCTCA CCGCGAAAAT TGGTGACGAA
ACCGTTGATT CTGTTTCCGG AATTTCCTAC GAAATTGGCA CCGGCAACAT GCTTGAAGGT
CTCGATGAGG CACTGACAGG GTTGTCCGCT GACGAGACCA CCACGTTCAC TGCTCCACTT
GCTGGCGGTG ACCACGCTGG TGAGGAGGCA ACGGTGACGG TGACCGCAAC AGCGGTCAAG
GAACGTCAAC TGCCAGAGGC AGATGACGAC TTCGCGCAAA TGGCCTCTGA GTTTGACACC
ATTGACGAAC TCAAAGACGA CCTCCGCGAG CAGGCGAAGA ACGCAGCTGC GTCCAACCAG
GCTGTCGCCG CACGTGATCT TCTCGTTGCG GAACTCAACA AGGTTGAGTT CCCACTGCCA
GCTGGCGTCA TTGAGGCTGA AGTGAACCGT CACCTCGAGG GAGAAGGGCG CCTTGAGGAC
GACGAGCACC GTGCGGAGGT TACTCAAGAG ACCACCACTG CGCTCAAGAA CCAACTTCTT
CTTGACACAC TCGCAGAGAA GCTCGAAGTG AAGGTTGCTC AGCAGGAGCT TCTTGACTAC
CTCATCTCTG CGTCACGCCA GTACGGCATG GATCCACAGC AGTTCATTTC CACCCTTGAC
CAACAGGGTC AAATCCCTGC CATGGTCGGT GAAGTGGCAC GTTCGAAGTC GCTGGCTGTT
GCACTTCGGT CAATCGAAGT CAAGGACGAG GATGGGAACG TTGTTGACCT GTCTGAGTTC
ATCGGCTCGG ACGAAGACGA TGCTGCCGCT GAAGAGATTG CCAAAGCCGC CCAACAGGCA
GCAGAGGGCG ACTCTGAAGA GCAAGCAACT GAGGACGCCT CACACTGA
|
|---|
| Protein sequence | MKSTVETLDP TKAKLTVEVE YDELQPAIEH AYTHIAQDIT IPGFRKGKVP PRIIDQRIGR
AAVLEHAVNE ALPGFYRDAL AQSELRPLGQ PSVEVTKVPL GDDEQGNLEF VVELEVRPDF
DLPELDGLSL QVPNVTVSDE DVEERLTSLR ERFGTLVGVD RPAADGDFVV IDLTAKIGDE
TVDSVSGISY EIGTGNMLEG LDEALTGLSA DETTTFTAPL AGGDHAGEEA TVTVTATAVK
ERQLPEADDD FAQMASEFDT IDELKDDLRE QAKNAAASNQ AVAARDLLVA ELNKVEFPLP
AGVIEAEVNR HLEGEGRLED DEHRAEVTQE TTTALKNQLL LDTLAEKLEV KVAQQELLDY
LISASRQYGM DPQQFISTLD QQGQIPAMVG EVARSKSLAV ALRSIEVKDE DGNVVDLSEF
IGSDEDDAAA EEIAKAAQQA AEGDSEEQAT EDASH
|
|---|
| |