Gene Jden_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0930 
Symbol 
ID8380107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp980776 
End bp981309 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content59% 
IMG OID645003670 
Productsingle-strand binding protein 
Protein accessionYP_003160889 
Protein GI256832162 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATG ATGCACGGAT CACCCTGACC GGGTGGATCG GTTCAACCCC ACGACTTTTT 
CCTGCTACCG ATGACGCAGT TGCCTACATG AGTATGCGAG TCGCCCACCG CAAAAGCTGG
TATCACCGCT CCAAAGGCGA ATGGGTTGAC GGACCAACAA CCTGGTACAC CGTCAAAGCC
TGGCGGGCAC TAGCAGAAAA CGTTGCTGCC TCACTGCGTA AAGGGGACCC AGTGATGATC
TGTGGGAACC TGACCAATGA CACGTGGGAA AGCCCCGACG GTGAGCGCGA AACCATGGTT
ATTGAAGCCG ACGCCATCGG ACCACACCTG GGACGTGGAC GTTGCGTGTT CACACCGATG
CGCGCCAGTG AGCCCAGTGA CACCACCCAG AACATGAACG CAAGCAACAC GAGCGAGGAC
GCTACCACCA CCGCGACAGG AACCCACCAG AGCCAACCGG CAACCGCATC GGTAGATGTG
ACACAATCCC TGACCGACCG CAGCGCCTCA ACTGACGCCC TGACCGCAGT GTGA
 
Protein sequence
MTHDARITLT GWIGSTPRLF PATDDAVAYM SMRVAHRKSW YHRSKGEWVD GPTTWYTVKA 
WRALAENVAA SLRKGDPVMI CGNLTNDTWE SPDGERETMV IEADAIGPHL GRGRCVFTPM
RASEPSDTTQ NMNASNTSED ATTTATGTHQ SQPATASVDV TQSLTDRSAS TDALTAV