Gene Jden_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0912 
Symbol 
ID8380091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp963933 
End bp965972 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content63% 
IMG OID645003654 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_003160873 
Protein GI256832146 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGT TCCGTAAGTG GCGGTATGGC AACTGGTTCA TTCCCGTTGT CTCGGGCCTC 
CTCATTCTCG TGTCGTTTGG CGTCGAAAAG CTCTTCGTCG GCAGCTGGAA CGTCACGGTC
GGTCCGCAAT GGTGGATCGA CGCTGGCGAA CACGCCCACG GTTCTGGTCA TGTGTTTACC
CTTGCGAACG CGTTCATGCT CGCCGCAGCA ATTGTCGCGG GGTACGGAAT CGTCGTGAAG
GCCGTCCGGG CACTGCTCGT AAAGTTCATC AGTATCGACC TGCTCGTATC GATTGCAGCG
TTCGGCGCGA TACTCATCGG CAACTTCTGG GAAGCTGCCG CCGTGACGTT CCTCTTCGCG
ATCGGTCACG CTCTCGAAGC CGGCACGATG AACAAGACCC GTGCAGCGCT CGCTGAGTTG
GTCGCGGTGG CCCCCGACGT TGCAGTCGTG ATGCGCGACG GTGAGCAGGT CGAGATCGCC
GCACATCAGG TGCGCATGGG CGAGATCGTG CTCGTAAAGA ACGGAGCGAA AGTTCCCGTC
GACGGGCAGG TCGTGTCAGG CACCGGAGCG ATCGACGAGG CATCGATCAC GGGTGAGTCG
ATCCCGGTCG AAAAGACGAA GTCAGATCAC GTGTTTGCGG GCACGATCTC GCGGGGCGGA
TTCCTACAGG TCATGGCGAC CGGCATCGGA GCCGACACGA CGCTCGCGCG CATCATTCAC
CGTGTCGAAG AAGCGCAGGA TGCGAAAGCG AAAACGCAGG CATTCATCGA CCGATTCTCG
AAGTGGTACA CGCCCGCGGT GATGGTACTC GCGCTTGCGG CGGGCCTCAT CTCTGGTGAC
GTAGTGCTCG GCCTCACGTT GCTCGTGATC GGTTGCCCGG GCGCGCTCGT CATCTCGATT
CCCGTGGCGA TCGTAGCGGG AATCGGCCGC TCGGCCCGCA ACGGGATTCT CATCAAGGGC
GGCGAGTACC TCGAAACCTC GGCCAAGATC TCGGCCGTCG CAGTCGATAA GACGGGGACT
CTCACCGAGG GCCGCCCGGT ACTCACCGAC ATCGTTGTGC TCAATCCTGA AGCGGATCGG
CGCGAGGTGC TTCGCTGGGC AGCCGCCGCA GAAGCAGGGT CCGAGCACCC ACTTGCCCGC
CCGATCCTCG ACACCGCACG AGAAGAAGGA GTGGCCCCCG AGGGGCTTCC GGGATCGGTC
ACACCGGTCG TGGGCAAGGG GATCGTGGCC GACGCTCACG ACAAGCGGGT ACTCATCGGT
AACGTGCCGC TGCTCGAACA GTACGGGATC GTGAACGACG CGGGGGCGGC TGTGGCTGCG
AAGAAACTGG CGGCGGCAGG CAAGACCCCG ATGATTGTCG CGGTCGATGA GAGCCTGCTT
GGCGTAATCG GTGTCGCAGA TACGATCCGC GAGGATGCCC CCGAGATGAT CAGGCGCTTG
CACGCTAGCG GGGTGCAGAA GGTGGTGATG CTCACCGGAG ATACGCGCCT TGTCGCCGAA
GCCATCGGTG AGGCGGTCGG CATCGATGAG ATCCATGCTT CGTTGCTACC CGAGGACAAG
CTCGACGCTG TCGCGCGGTT GCAGCGCGAG GGGCACACGG TCGCGATGGT GGGCGACGGC
GTGAACGACG CCCCGGCCCT CGCGACCGCC GACATTGGTG TTGCCATGGG TGCAGCGGGC
TCAGCGGTGG CCGTGGAGAC GGCAGACATT GCCCTGATGG GTGACAACCT CTTGAAACTG
CCCGAAGCAA TCAGCCTCGC CAAACGCACC GTGAACGTCA TGCGCCAGAA CATCTGGATC
GCGCTCATCA CCGTTGTCGT GCTGCTCGTC GGGGTCTTCG CAGGGGGTGT CACGATGGCT
ATCGGCATGC TCGTGCACGA GGGATCGGTG CTCATCGTAA TCCTCAACGC GGTGCGCCTG
CTGCGCAACA CCCAAGGAGC CACTGCGTTG TCGAGGAGTG AACGCGCCCG AGCCGCACAT
GAAACAGGCC GCCCGGTCGA ACCAGCCACG GCCCAGAGTT CATCCGAACT TCCATCTTGA
 
Protein sequence
MNAFRKWRYG NWFIPVVSGL LILVSFGVEK LFVGSWNVTV GPQWWIDAGE HAHGSGHVFT 
LANAFMLAAA IVAGYGIVVK AVRALLVKFI SIDLLVSIAA FGAILIGNFW EAAAVTFLFA
IGHALEAGTM NKTRAALAEL VAVAPDVAVV MRDGEQVEIA AHQVRMGEIV LVKNGAKVPV
DGQVVSGTGA IDEASITGES IPVEKTKSDH VFAGTISRGG FLQVMATGIG ADTTLARIIH
RVEEAQDAKA KTQAFIDRFS KWYTPAVMVL ALAAGLISGD VVLGLTLLVI GCPGALVISI
PVAIVAGIGR SARNGILIKG GEYLETSAKI SAVAVDKTGT LTEGRPVLTD IVVLNPEADR
REVLRWAAAA EAGSEHPLAR PILDTAREEG VAPEGLPGSV TPVVGKGIVA DAHDKRVLIG
NVPLLEQYGI VNDAGAAVAA KKLAAAGKTP MIVAVDESLL GVIGVADTIR EDAPEMIRRL
HASGVQKVVM LTGDTRLVAE AIGEAVGIDE IHASLLPEDK LDAVARLQRE GHTVAMVGDG
VNDAPALATA DIGVAMGAAG SAVAVETADI ALMGDNLLKL PEAISLAKRT VNVMRQNIWI
ALITVVVLLV GVFAGGVTMA IGMLVHEGSV LIVILNAVRL LRNTQGATAL SRSERARAAH
ETGRPVEPAT AQSSSELPS