| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0907 |
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| Symbol | |
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| ID | 8380089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 961576 |
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| End bp | 962244 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003651 |
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| Product | Exonuclease RNase T and DNA polymerase III |
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| Protein accession | YP_003160871 |
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| Protein GI | 256832144 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.206307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA GCGCACCCAC TCACCCCATT GTGTGGATCG ACTGCGAAAT GACCGGGCTC
GACATCACCC AAGATGCGCT CATCGAAATC GCAGCGATCG TGACCGACAG CGAGCTCAAT
CCCCTCGACG AGGGGATTGA CCTCGTCATC AAACCTCCCA CAGAAGCCCT GACCACGATG
GGCGACTTTG TGCGGACCAT GCACACCCGC TCCGGGCTGC TCAACGAACT CGACGACGGA
CTCACCCTCG AAGACGCCGA ACAACGTGTG TTGCGCTACG TCAAAAAACA CAGTCCCGTA
GCCCGTAAAG CCCCCCTGGC AGGAAACTCT GTGGGCACGG ACCGTCTCTT CCTCAACAGA
GACATGCCTG CCCTCACCGC GCACCTGCAC TACCGCATCA TCGACGTGTC TTCCATGAAA
GAACTCGCAC GCCGCTGGTA CCCCCGCACC TACTACGCCG CACCTGGGAA AAACGGGGGA
CACCGAGCGC TCGCAGACAT CCTGGAATCC ATTGATGAAC TGCGGTACTA CCGCAAGGCC
ATGTTCAAAG AGAGCCCAGG CCTTGACACA CAACAATCAC GTCGGGTCGC AGCGGACATT
GTGCAGAACT CTGTCAGCGG AACGATCACC GCACTGTCCG TTCCCTCCTC CGAGGACACC
CCCAACTAG
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| Protein sequence | MTNSAPTHPI VWIDCEMTGL DITQDALIEI AAIVTDSELN PLDEGIDLVI KPPTEALTTM
GDFVRTMHTR SGLLNELDDG LTLEDAEQRV LRYVKKHSPV ARKAPLAGNS VGTDRLFLNR
DMPALTAHLH YRIIDVSSMK ELARRWYPRT YYAAPGKNGG HRALADILES IDELRYYRKA
MFKESPGLDT QQSRRVAADI VQNSVSGTIT ALSVPSSEDT PN
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