| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0887 |
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| Symbol | |
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| ID | 8380070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 948450 |
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| End bp | 949082 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645003628 |
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| Product | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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| Protein accession | YP_003160852 |
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| Protein GI | 256832125 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCCC GCATCGTTCT TGCCACACAC AACGACCACA AGGTCCGTGA ACTTGCCGCG
ATCCTCGCCG CAGAACCCGC GCTCGCGTTC CTTAAGGACG GTGCGGTGGT GTCCGCGTCG
GCGTTCGATG TCACCCCGCC CGTTGAGGAT GCGGTGACGT TCGAGGACAA CGCGCTGATC
AAAGCACGTG TTCTGGCACA AGAAACCGGT CTCGTTGCCA TTGCTGATGA CTCCGGACTT
GCCGTGGACG TTCTTGGAGG AGCTCCAGGT ATTTTCTCAG CCCGGTGGGC AGGAGGCCAT
GGGGATGATC AGGGGAACCT TGACCTGCTG TTGCGCCAAC TTGAGGACGT CCCCACTGAG
CACCGCTCGG CACGGTTCGT GTGTGCGGCC GCACTGGTGA CCCCCAACGG GGACGAACAT
GTGGAACGTG GAACACTGGA AGGCACCCTC TTGACCGCGC CGCGAGGCGA GGGTGGGTTT
GGGTATGACC CCATCCTTCT TCCGTTGGGT TATGACCGGT CCTGCGCTGA ACTCAGCGCC
GAGGAAAAGA ACGCGATCAG CCACCGAGGC AACGCGTTCC GGGCGCTAGT CCCGCATATC
GTTGCTGCGT TGGGCGCGCA CGCGAACAAC TGA
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| Protein sequence | MSARIVLATH NDHKVRELAA ILAAEPALAF LKDGAVVSAS AFDVTPPVED AVTFEDNALI
KARVLAQETG LVAIADDSGL AVDVLGGAPG IFSARWAGGH GDDQGNLDLL LRQLEDVPTE
HRSARFVCAA ALVTPNGDEH VERGTLEGTL LTAPRGEGGF GYDPILLPLG YDRSCAELSA
EEKNAISHRG NAFRALVPHI VAALGAHANN
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