Gene Jden_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0878 
Symbol 
ID8380061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp939881 
End bp941476 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content61% 
IMG OID645003619 
Producthypothetical protein 
Protein accessionYP_003160843 
Protein GI256832116 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAC CCGCAGAGGG CACCCCCACC GACGATCGCA CATCGGCCAT GGACGAACCA 
CAGGCGGCTG TTCCACCCAC CGGGCACCAC CCCGCTGCGA CCGCCGACTA CGCACCCACC
CAGCCCTCCG CAGCCTCCGC GTTCCGCAAC CCAGACGACC TCCTTGCGGA CCTTCAAGAC
CTCGGAGACG AACTCCCCTC CTTCACCGCG AAAAACCGCA AACGACGCCC CAAAGCAGCC
GACGCTGAAG TGGTCCGCCC CAAAGCGCGA CTCCCCCTTG GGCAACTTGT CTCCCGGCTC
CTCAAAGACC CCACCGCCTC AGTGCCCATC GAACGCCCTG AGGACAAAGT CGACCACATC
CTCACCATGA TGCGAGTCCT TGGGCTTGCC ATGCTCGACG CCGGACAAGC CACCAGCGAC
GTCCAAGAAG CCCTCTTCGT CATTGCACGC GCCTACGCGA TGCCACCCGT GCGCGTCATT
GTCATGCCCA CAGTGGTCAT TGTCCAAATT GAAGGAACCG ACCGGCGCAT CGAAATAGGG
TCCGTGCACG GCGAAAGCCT GCGCTCCGAC CAAGCGGCCG CGATCGATGA CCTCATCACG
AAAACCCGGC GCGGCATCAT GGAACCTGAC GCTGTCATCG AACACGTCGG AGCGATCACC
CGATCGCAAC CACGATTCGG ATGGTTCCTC CAACTCATCG GCCACATCAT CATGACCCTG
TCCATTGGGT TCCTCATCAA CCCGGCCGCA TCCGCGATCC CCGCCTACCT CATCCTGGGC
ACCATCGTGG GATCGCTCGT CCTCATCAGC GACAAATTCC CCACGATCAA ATCGGCGCTC
CCCGTCATCG CCGCAATCAC CGTGACAGTG GTCGCCTCCC AGTTCCTGAC CGGGTTCACC
GACGAACTGC CCTTACGACT CATCGCCCCC GCACTCGTCC CCTTCCTGCC CGGTCTCACC
TTGACTATCG CGGCGTTGGA ACTAACCCGC AATGAGGTGA TCTCTGGCTC ATCACGGCTC
ATCTATGGGA TCGCACAACT TTTACTCCTT GCGTTTGGGG TTGTCATCGG CCTTGAGCTT
GTCCCGGGCC ACACCACATC CACTGACCTT GTTCTCAACA CCATTGGACC GTGGGTTCCG
CTGCTAGGTA TCACCTTGCT TGCCATGGGG TACGTGCTGG CACTCTCAGC ACCAGAAGGA
GCGTTCCCCT GGATCGTGCT CGCACTGACT GCCACTTGGG GAATGCAACG CCTCGGCGCG
TTTCTTGTCC CCGCTGAAAT CTCCGGTTTC TTCGGTGCAC TCATTGTTGT GCCGTTGTCC
CGGTTCCTCT CCCAGTTCCG CACAGCCCCA CCCGCCCTCG TCATCCAGGT GGTGTCCTTC
TGGATCCTTG TGCCTGGGTC GTTAGGGTTC ATCAGCTTCA CTGAAGCTGC TACCGGATCA
AACGAAACAA TCAACATTCT TGTGTCCACC GGGATGGCCA TGTTCTCCAT CGCGCTGGGG
ATCCTCGTCG GCTCAGGACT GGAACGCAAC GGTGGGGCTC TCCGCGAAAA GCGCCTTTCC
CTGCGCCATC TGGCAGACAA AGCCCGAAAA AAGTAA
 
Protein sequence
MTTPAEGTPT DDRTSAMDEP QAAVPPTGHH PAATADYAPT QPSAASAFRN PDDLLADLQD 
LGDELPSFTA KNRKRRPKAA DAEVVRPKAR LPLGQLVSRL LKDPTASVPI ERPEDKVDHI
LTMMRVLGLA MLDAGQATSD VQEALFVIAR AYAMPPVRVI VMPTVVIVQI EGTDRRIEIG
SVHGESLRSD QAAAIDDLIT KTRRGIMEPD AVIEHVGAIT RSQPRFGWFL QLIGHIIMTL
SIGFLINPAA SAIPAYLILG TIVGSLVLIS DKFPTIKSAL PVIAAITVTV VASQFLTGFT
DELPLRLIAP ALVPFLPGLT LTIAALELTR NEVISGSSRL IYGIAQLLLL AFGVVIGLEL
VPGHTTSTDL VLNTIGPWVP LLGITLLAMG YVLALSAPEG AFPWIVLALT ATWGMQRLGA
FLVPAEISGF FGALIVVPLS RFLSQFRTAP PALVIQVVSF WILVPGSLGF ISFTEAATGS
NETINILVST GMAMFSIALG ILVGSGLERN GGALREKRLS LRHLADKARK K