Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0878 |
Symbol | |
ID | 8380061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 939881 |
End bp | 941476 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003619 |
Product | hypothetical protein |
Protein accession | YP_003160843 |
Protein GI | 256832116 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACAC CCGCAGAGGG CACCCCCACC GACGATCGCA CATCGGCCAT GGACGAACCA CAGGCGGCTG TTCCACCCAC CGGGCACCAC CCCGCTGCGA CCGCCGACTA CGCACCCACC CAGCCCTCCG CAGCCTCCGC GTTCCGCAAC CCAGACGACC TCCTTGCGGA CCTTCAAGAC CTCGGAGACG AACTCCCCTC CTTCACCGCG AAAAACCGCA AACGACGCCC CAAAGCAGCC GACGCTGAAG TGGTCCGCCC CAAAGCGCGA CTCCCCCTTG GGCAACTTGT CTCCCGGCTC CTCAAAGACC CCACCGCCTC AGTGCCCATC GAACGCCCTG AGGACAAAGT CGACCACATC CTCACCATGA TGCGAGTCCT TGGGCTTGCC ATGCTCGACG CCGGACAAGC CACCAGCGAC GTCCAAGAAG CCCTCTTCGT CATTGCACGC GCCTACGCGA TGCCACCCGT GCGCGTCATT GTCATGCCCA CAGTGGTCAT TGTCCAAATT GAAGGAACCG ACCGGCGCAT CGAAATAGGG TCCGTGCACG GCGAAAGCCT GCGCTCCGAC CAAGCGGCCG CGATCGATGA CCTCATCACG AAAACCCGGC GCGGCATCAT GGAACCTGAC GCTGTCATCG AACACGTCGG AGCGATCACC CGATCGCAAC CACGATTCGG ATGGTTCCTC CAACTCATCG GCCACATCAT CATGACCCTG TCCATTGGGT TCCTCATCAA CCCGGCCGCA TCCGCGATCC CCGCCTACCT CATCCTGGGC ACCATCGTGG GATCGCTCGT CCTCATCAGC GACAAATTCC CCACGATCAA ATCGGCGCTC CCCGTCATCG CCGCAATCAC CGTGACAGTG GTCGCCTCCC AGTTCCTGAC CGGGTTCACC GACGAACTGC CCTTACGACT CATCGCCCCC GCACTCGTCC CCTTCCTGCC CGGTCTCACC TTGACTATCG CGGCGTTGGA ACTAACCCGC AATGAGGTGA TCTCTGGCTC ATCACGGCTC ATCTATGGGA TCGCACAACT TTTACTCCTT GCGTTTGGGG TTGTCATCGG CCTTGAGCTT GTCCCGGGCC ACACCACATC CACTGACCTT GTTCTCAACA CCATTGGACC GTGGGTTCCG CTGCTAGGTA TCACCTTGCT TGCCATGGGG TACGTGCTGG CACTCTCAGC ACCAGAAGGA GCGTTCCCCT GGATCGTGCT CGCACTGACT GCCACTTGGG GAATGCAACG CCTCGGCGCG TTTCTTGTCC CCGCTGAAAT CTCCGGTTTC TTCGGTGCAC TCATTGTTGT GCCGTTGTCC CGGTTCCTCT CCCAGTTCCG CACAGCCCCA CCCGCCCTCG TCATCCAGGT GGTGTCCTTC TGGATCCTTG TGCCTGGGTC GTTAGGGTTC ATCAGCTTCA CTGAAGCTGC TACCGGATCA AACGAAACAA TCAACATTCT TGTGTCCACC GGGATGGCCA TGTTCTCCAT CGCGCTGGGG ATCCTCGTCG GCTCAGGACT GGAACGCAAC GGTGGGGCTC TCCGCGAAAA GCGCCTTTCC CTGCGCCATC TGGCAGACAA AGCCCGAAAA AAGTAA
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Protein sequence | MTTPAEGTPT DDRTSAMDEP QAAVPPTGHH PAATADYAPT QPSAASAFRN PDDLLADLQD LGDELPSFTA KNRKRRPKAA DAEVVRPKAR LPLGQLVSRL LKDPTASVPI ERPEDKVDHI LTMMRVLGLA MLDAGQATSD VQEALFVIAR AYAMPPVRVI VMPTVVIVQI EGTDRRIEIG SVHGESLRSD QAAAIDDLIT KTRRGIMEPD AVIEHVGAIT RSQPRFGWFL QLIGHIIMTL SIGFLINPAA SAIPAYLILG TIVGSLVLIS DKFPTIKSAL PVIAAITVTV VASQFLTGFT DELPLRLIAP ALVPFLPGLT LTIAALELTR NEVISGSSRL IYGIAQLLLL AFGVVIGLEL VPGHTTSTDL VLNTIGPWVP LLGITLLAMG YVLALSAPEG AFPWIVLALT ATWGMQRLGA FLVPAEISGF FGALIVVPLS RFLSQFRTAP PALVIQVVSF WILVPGSLGF ISFTEAATGS NETINILVST GMAMFSIALG ILVGSGLERN GGALREKRLS LRHLADKARK K
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