| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0856 |
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| Symbol | |
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| ID | 8380039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 922511 |
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| End bp | 923746 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003597 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003160821 |
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| Protein GI | 256832094 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0383004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA TCGCCCTCCT CGAACACGAC GTTCGAGAAC GCGTACGACA CGCGGGCATC
GACCCCGTTG CTGACCCCAC GACCACTCGA AGTCTCATCA CTGACGCTCT CAAAGACTAC
GAACGTCAAG CCCTACGCGG GTATGTCCCT GCCATTGCAG ACTCACACCA AATTGCCAAG
TCACTCCTTG ATTCTGTCGC CGGGTTCGGT CCACTCCAAC CGTACCTAGA CGACCCAGAA
GTCGAAGAAA TCTGGATCAA CTCACCTTCC CAAGTGTTTG TGGCAAGATC TGGTGTTGCA
GAACTGACCC CCACAGTTCT CAGCGCTGAT GACGTTGCAC GGCTCGTCGA ACAAATGCTC
AAAAGCACCG GCCGGCGCCT TGACCTGTCC ATGCCATTTG TCGACGCCAT GCTGCCAGAT
GGCTCCCGCC TGCATGTTGT CATCCCTGAC ATCACCCGTG CACACATGGC CGTGAACATC
AGGAAGTTCG TGGCCCGGGC AGCGCACCTC ACTGACCTTG TTGCGCGCGG CATGCTCCCC
ACTTCTGCCG CCACCTTTCT CGATGCATGT GTCCGTGCCG GCCTCAACAT TGTTGTCGCC
GGGGCAACTG GCGCAGGTAA AACCACCTTC CTGCGTGCCC TCACCGGCTC CGTCAGCCCA
CTAGAACGCA TCGTCACTGT CGAAGAAGTG TTTGAACTCA ACCTCACCCA CCGCGATGTC
GTGGCCATGC AATGCCGTAG TGCCAACCTC GAAGGAAGCG GCGAGATTTC ACTGCGCCGC
CTCGTTAAAG AATCCCTGCG TATGCGCCCC GACCGTGTCA TCGTCGGAGA GGTCCGTGAA
GCAGAATCCC TCGACCTCCT CCTCGCCCTC AACTCCGGAA TGCCCGGCAT GGCGACCATC
CACGCGAACT CAGCAAAAGA AGCAGTCACA AAACTCACCA CACTGCCACT ACTCGCGGGC
GAAAACGTCA CCGCACAGTT CGTTGTTCCC ACCGTCGCCC AAGCAGTAGA CATCGTCATC
CACATTCAAC GAGACCGCCA AGGACACAGA ACAGTGCGCG AAATCGCGGC ACTATCAGGA
CGCATCGAAA ATGATGCGAT TGAAGTGGGA ACCGTGTTCC GGCAAGCACA AGGCCAACTA
GTCCGCGCAG ACGCCTACCC ACCAAAACCA GAACAGTTTG ACCGTGTCGG CATTGATGTG
GCAAGTATCC TCAACGGGGG TGCACCATGG GCATAA
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| Protein sequence | MDAIALLEHD VRERVRHAGI DPVADPTTTR SLITDALKDY ERQALRGYVP AIADSHQIAK
SLLDSVAGFG PLQPYLDDPE VEEIWINSPS QVFVARSGVA ELTPTVLSAD DVARLVEQML
KSTGRRLDLS MPFVDAMLPD GSRLHVVIPD ITRAHMAVNI RKFVARAAHL TDLVARGMLP
TSAATFLDAC VRAGLNIVVA GATGAGKTTF LRALTGSVSP LERIVTVEEV FELNLTHRDV
VAMQCRSANL EGSGEISLRR LVKESLRMRP DRVIVGEVRE AESLDLLLAL NSGMPGMATI
HANSAKEAVT KLTTLPLLAG ENVTAQFVVP TVAQAVDIVI HIQRDRQGHR TVREIAALSG
RIENDAIEVG TVFRQAQGQL VRADAYPPKP EQFDRVGIDV ASILNGGAPW A
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