| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0855 |
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| Symbol | |
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| ID | 8380038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 921027 |
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| End bp | 922334 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003596 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_003160820 |
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| Protein GI | 256832093 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000185611 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGACC CCCAGCCCAC ACCCACCGCC CCCACCGAAT CAGCCCTGCC CCGCTACCGC
CCCGGCATCA AATACATCCT CATGCTTGGT GCGATCGCGG CGATTCCCGC GATCACCACA
GACATCTACC TGCCTTCACT AACAGATGTC CGCGACGAAC TCGCCACCAC CGACGCCATG
GTTGCGATGA CCATGTCAGG CATGCTCATC GGAGGGGCTG TCGGACAACT CATGTGGGGA
CCCCTCACCG ACCGATACGG CCGCAAAGCG CCACTCTTGG TGGGTCTGGC GTTACACATC
ATCACCTCTC TGCTCTGCGC GATCGCACCG AACATCACGA TTCTTGTTAC GTTGCGCATT
ATGCAGGGGT TCTTCAACGC AGCATGCGCT GTGGCTGCAA TATCTGTGAT CCGAGACCGC
TTTGTGGGTG CAACTGCAGC TCGACTGCTC TCCCAACTCA TGTTGGTTAT TGGGGTGGCG
CCCCTGTTCG CCCCCAGTGT GGGCGGTGCG ATCGCATCGT TTGGTTCGTG GCGCACCGTG
TTTCTTGCGC TCGCGATCAT TGGGGCGATC ATGGCCGTCA TTGTCGCCCG CTTCCTGCCC
GAAACCCTGG CCGAAGATCA CCGGCTCACC GGTGGGGTGG GGCGCGTTGC CAAGGGGTAC
TGGACGTTAG CGAAAGACCG GAAGTTTCTT GCGCTCGCGA TGCTCCCAGC GCTCGCTATG
ACGACCATTT TTGCGTATGT TGTGGGGTCA CCGTTTGTGT TCCAAGAACA CTATGGTCTC
TCCACATCGC AGTATGCGGT TCTCTTTGCC ATGAACGGTC TTGCCATGGT GTTTTCCGCG
CAGCTGAACG CATCCCTGGT GCGAAAGTTT TCGCCTGAAT CGTTGCTGAG GGTGGGACTT
GGTCTTCAAC TGGTGCTCGC ACTTGCGCTA GTGCTGTGGG GCGCCACCGG CTGGGGCGGT
TTCTGGACGT TCGAGGTAAC ACTGTGGCTT CTGTTGGGAT GCCAAGGACT CATCGGCGCA
AACGCACAGG TCTTAGCATT AGCGAACTAC GGGCACATGG TGGGAACAGC TGCCGCTGTC
CTTGGGTCAC TCCAGTCAGG TGTGGCAGGT GCAGTCAGCC CGATGGTGGG AGTCTTTGGT
GGCGATGCGC TGGCCATGGC GGCAGTGATC GCCGCCGGGT TGATCCTCGC GAACCTCATC
GTGGTGTTCG GTACTGACCT CACCCAAGCA GGTCGTAAAG CTCGAGCCCG CACCACACTG
CAACGCGCTA TCAAGGAACG AGAGATCGGC GACTCAACTC ACGGCTAA
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| Protein sequence | MNDPQPTPTA PTESALPRYR PGIKYILMLG AIAAIPAITT DIYLPSLTDV RDELATTDAM
VAMTMSGMLI GGAVGQLMWG PLTDRYGRKA PLLVGLALHI ITSLLCAIAP NITILVTLRI
MQGFFNAACA VAAISVIRDR FVGATAARLL SQLMLVIGVA PLFAPSVGGA IASFGSWRTV
FLALAIIGAI MAVIVARFLP ETLAEDHRLT GGVGRVAKGY WTLAKDRKFL ALAMLPALAM
TTIFAYVVGS PFVFQEHYGL STSQYAVLFA MNGLAMVFSA QLNASLVRKF SPESLLRVGL
GLQLVLALAL VLWGATGWGG FWTFEVTLWL LLGCQGLIGA NAQVLALANY GHMVGTAAAV
LGSLQSGVAG AVSPMVGVFG GDALAMAAVI AAGLILANLI VVFGTDLTQA GRKARARTTL
QRAIKEREIG DSTHG
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