| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0853 |
|---|
| Symbol | |
|---|
| ID | 8380036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 919461 |
|---|
| End bp | 920273 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645003594 |
|---|
| Product | protein of unknown function DUF159 |
|---|
| Protein accession | YP_003160818 |
|---|
| Protein GI | 256832091 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000182403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGTC GGTACGCATC CGCGGCGCAA ACCATTGACC TTGTCAATGC GTTTGCGTTG
GCCGGCTATC ACATGGATCC CCTATTTTCG TCTGAGGCTT ACCACTGGTC ACCGTCGTGG
AACATCGCCC CAGGCCAGAT GGTCCGTATT GTCGTTGACC GGCCACCCCC AGCAACGGGT
CGAGTGGATC TTGTCGATGC GGCTGGCACG GCGGTCACCA ACCGAACCGA TCCCGACACC
GAAGCTGACA CTGACTGTTC ATGTTGGCAG GTTCACCTGG CTCGCTGGGG TCTGGTGCCA
TCGTGGGCTA AAGATCCACG TATCGGCCAT AAAATGATCA ACGCACGCCG GGAGACGGTG
GCGGACAAAC CAGCGTTCCG GGCTGCGGTC CGCACTCGAC GGTGTCTGAT CCCCGCGATG
GGCTATTACG AATGGCAACA CCATGACTCT GGCCCCACCA CACCCTGGTT TATCCACCCC
AGTGACACGG ACCTCACCAT GTTTGCTGGG TTGTACGAAT TTTGGCGTGA CCCAAACGAT
CCGTCTGGTC CGTGGCTGAC CACAACCACG ATCATCACGA CCGCCGCGTT ACCCCAGTTC
GCTGACATTC ATGATCGTCG GCCGGTCATG CTTGCCCCAG ATACGTGGGC GGCGTGGCTC
AGTGCAGACA CCCCCCGTGA CCATGCTCTG TCGCTTCTCG ATGCGCCCCC TGTCCCTGCT
GAGGCTCATC GGGTCGCGCG CACTGTGGGG AACGTCGTGG CCAATGGTCC TGACCTTATC
GTCCCTGTGG AGAGTACGCC CACTGCACCC TAA
|
|---|
| Protein sequence | MCGRYASAAQ TIDLVNAFAL AGYHMDPLFS SEAYHWSPSW NIAPGQMVRI VVDRPPPATG
RVDLVDAAGT AVTNRTDPDT EADTDCSCWQ VHLARWGLVP SWAKDPRIGH KMINARRETV
ADKPAFRAAV RTRRCLIPAM GYYEWQHHDS GPTTPWFIHP SDTDLTMFAG LYEFWRDPND
PSGPWLTTTT IITTAALPQF ADIHDRRPVM LAPDTWAAWL SADTPRDHAL SLLDAPPVPA
EAHRVARTVG NVVANGPDLI VPVESTPTAP
|
|---|
| |