Gene Jden_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0834 
Symbol 
ID8380017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp896299 
End bp898101 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content59% 
IMG OID645003575 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_003160799 
Protein GI256832072 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCC CACTGACAGA AGACGAGCTC CTCCTCCTCG ACGAAGCACG TACCTGGATT 
GACAACGACC CAGAAGGACT CACCCGTCAC GAGCTTCAAC GCCTGCTCGA CGTGATCACC
AACCCTGATA ACTCCTCCGC GTCCAAAGGC CGCTCGTCTC AAGCGCTCGG AGACCTCAAA
GACCGCTTCA ACGGCAGCCT CCAATTTGGT ACCGCCGGGC TACGCGGCGC CCTAGAAGCA
GGCCCAAACC GGATGAACAG GTCTGTGGTC ATCAAAGCAG CGGCCGGTCT TGGCGCCTAT
CTCACCGGTC AACTCCCGCA CGCCACTCCA CAGGTTGTCA TCGGTTACGA TGCCCGGCAC
TACTCCAAGC AGTTTGCACT CGACTCCGCA GCAGTGCTCA CCGCCGCAGG CTGCTCTGTC
ACAATCCTCA ACCACGCACT ACCCACCCCC GTGCTTGCCT ACACCATGAA ACGCCTGGGT
TCTGACGCAG GCATCGTGGT TACCGCAAGC CACAACCCGC CGCAAGACAA CGGCTACAAG
GTGTACCTAG GTGGACGCAT CGTTGTGGAC GCCGGTCAAG GCGCTCAAAT TGTGCCCCCT
TACGACCGTG AAATCGCCCA AGCAATTGCC GCAACCCCAC CGGTACGAGA CATTCCACGG
GCCGAAAGTG GGTGGTTCAC CCTTGATGAC AACGCGGTGA CCAGTTACGT CAACGCGGTC
CTCACACTAA AAACACCCAG CCCTCGCGAC CTCACCATCG TGCTCACACC ACTACATGGT
GTCGGCGGGT CTGTGGTCGA CAAGGTTCTC CACCGCGCCG GCTTTGACAA GCTCATCTCT
GTGGCAGAAC AATACGAACC CAATGCCGAT TTCCCCACAG TGTCCTTCCC CAACCCAGAA
GAGCCAGGTG CCATCGACCT TGCGTTAACC TATGCGATGC GGTTCCAGGC AGACCTTGTC
ATTGCGAACG ACCCTGACGC TGACCGGTGC GCAGTTGCAG TCAAAGATCC CCGAACCGCG
GCAGCCCACG CCCACCGCGT CACCACCCCT CAGGCGGCGG GTTGGCGGAT GCTTCACGGC
GACGAAGTGG GATCATTGCT CGGAAACGTC ATCGCCCAAC GCGCCGCAGC AGAAGGCAAA
ACAGCCGCAA ACGCAGTCCT CGCCAATTCA ATTGTCTCCT CACGGCTGTT GTCGAAAATC
GCTGAGAAAC ACGGATTGGG GTACCAATCC ACACTCACGG GATTCAAATG GATCGCCCGT
GCAAAGGACC TCGTCTACGG GTACGAAGAA GCCCTCGGCT ACTGTGTTGC CCCTGAACTC
GTCAAAGACA AAGATGGAAT CTCCGCAGCT CTTGTCATCG CTCAGCTCGC TGCCACGCTG
CACGCCCAAG GCAAAACCCT CATCGACGAA CTCGATGACC TCGCGCGAGA ACACGGCCTA
TACCTCACCG ATCAACTCTC GGCACGGTTC TTAGACCTGT CACAAATTCC CGCCACCATG
TCACGTCTTC GTGCCACTCC CCCATCAGCC CTCGCAGGTA GCCCAATCAC CCAGGTCGTT
GACCTTGTTG ACGGCTACGA AGGTCTTCCC CCAACTGACG GCCTACTCCT GCTCACTGAC
GATGACACCC GAGTCATTGT GCGCCCATCA GGCACTGAAC CAAAGGTGAA GTGTTACATC
GAAGTGATCA GTCCCGTGGA CAGTGACGCA GACACAGCAC AACTCACCAC CGTGCGCCAC
GAAGCACGAG AAAAGATCAC AGCGGTACGC GCAGACATGA CCAGAGCGCT TGGACTCGAC
TAG
 
Protein sequence
MAIPLTEDEL LLLDEARTWI DNDPEGLTRH ELQRLLDVIT NPDNSSASKG RSSQALGDLK 
DRFNGSLQFG TAGLRGALEA GPNRMNRSVV IKAAAGLGAY LTGQLPHATP QVVIGYDARH
YSKQFALDSA AVLTAAGCSV TILNHALPTP VLAYTMKRLG SDAGIVVTAS HNPPQDNGYK
VYLGGRIVVD AGQGAQIVPP YDREIAQAIA ATPPVRDIPR AESGWFTLDD NAVTSYVNAV
LTLKTPSPRD LTIVLTPLHG VGGSVVDKVL HRAGFDKLIS VAEQYEPNAD FPTVSFPNPE
EPGAIDLALT YAMRFQADLV IANDPDADRC AVAVKDPRTA AAHAHRVTTP QAAGWRMLHG
DEVGSLLGNV IAQRAAAEGK TAANAVLANS IVSSRLLSKI AEKHGLGYQS TLTGFKWIAR
AKDLVYGYEE ALGYCVAPEL VKDKDGISAA LVIAQLAATL HAQGKTLIDE LDDLAREHGL
YLTDQLSARF LDLSQIPATM SRLRATPPSA LAGSPITQVV DLVDGYEGLP PTDGLLLLTD
DDTRVIVRPS GTEPKVKCYI EVISPVDSDA DTAQLTTVRH EAREKITAVR ADMTRALGLD