Gene Jden_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0815 
Symbol 
ID8379998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp876262 
End bp877287 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content55% 
IMG OID645003556 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003160780 
Protein GI256832053 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CATCAGCCCG CCAGCGCATC TTGTCTGGAA TGCAACCCAC CAATGATTCC 
CTCTCTATTG GAAACTACAT TGGTGCGATG ACCCAATGGG TGAGCCTCCA AGATGACTTC
GATGCGTTCT ACATGGTGGC GGACTTGCAT GCGCTGACAG TCAACCCAGA CCCTGACAAA
CTCCGGGAGC GGACCCGCCG CACCCTCGCC CAGTATCTTG CGGGGGGAGT GGATCCGGAA
CGGTCCACTC TCTTCTTGCA GTCGCACGTG CCGGCCCACG CTGAACTGTC GTGGCTGTTG
TCCTGCCACA CAGGTTTTGG CGAATTGAGT CGAATGACGC AGTTCAAAGA CAAAGCAGCG
AAACAAGGGA CGGAAACCGC CACAGCTGGA CTGTTTAGCT ACCCCGTCCT CATGGCTGCC
GACATACTTC TTTATGACGC GGCCCGTGTT CCTGTGGGTG AGGACCAACG TCAGCACCTT
GAATTGACAC GCAATCTCGC CGAACGCATG AACAGCCGTT ACGGTGCGGA CACCTTCGTG
GTTCCGGAAC CACACATCGT CAAAGCAGTA GCAAAAATCT ATGACTTGCA ACAACCAACG
CAGAAAATGT CGAAATCTGA GGTTGGTAAA GGAACAATTT GGTTGCTGGA CGACCCGGCG
AAAGCAGCTA AAAAAATCAA ATCAGCTGTC ACTGACGCTG GAACTGACAT TACCTATGAC
CCGGTGAACA AACCAGGGAT CTCGAACCTG CTCACAATAT TTGCCTACCT GACCGACCGA
ACCATCAGTG ATCTCGAGCA CGAGTTCGAG GGACAACAAT ACGGCCATCT CAAGGTCGCA
CTCGCAGACG TTGTCGCTGA GTTCCTGACT GAGTTCCAAA CGAAAGTCCA CACATTTTTG
GATGACCGCG CTCAACTTGA TGCGATCCTC CGTGTTGGTG CGCACAAGGC TGGCGACGTT
GCACAGGACA CCCTTCGGCG AGTCAACGAC CGGCTGGGGC TGCTCCTGAG CGGTGAGCAG
GCTTAA
 
Protein sequence
MTTPSARQRI LSGMQPTNDS LSIGNYIGAM TQWVSLQDDF DAFYMVADLH ALTVNPDPDK 
LRERTRRTLA QYLAGGVDPE RSTLFLQSHV PAHAELSWLL SCHTGFGELS RMTQFKDKAA
KQGTETATAG LFSYPVLMAA DILLYDAARV PVGEDQRQHL ELTRNLAERM NSRYGADTFV
VPEPHIVKAV AKIYDLQQPT QKMSKSEVGK GTIWLLDDPA KAAKKIKSAV TDAGTDITYD
PVNKPGISNL LTIFAYLTDR TISDLEHEFE GQQYGHLKVA LADVVAEFLT EFQTKVHTFL
DDRAQLDAIL RVGAHKAGDV AQDTLRRVND RLGLLLSGEQ A