| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0811 |
|---|
| Symbol | |
|---|
| ID | 8379994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 872780 |
|---|
| End bp | 873313 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645003552 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003160776 |
|---|
| Protein GI | 256832049 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCAC AGCCCTGGGA AGAGATCGTC CGCAACCACT CTGCACGCGT GTACCGGCTC
GCGTACCGTC TCACCGGGAA CCAACAAGAC GCTGAAGACC TCACCCAAGA TGTTTTCGTC
CGTGTCTTCC GTTCACTTGA CACCTACGAA CCAGGTTCTT TCGAAGGGTG GCTCCACCGC
ATCACCACCA ACCTCTTCCT CGACTCTGTG CGTCGTCAAC GCCGCATCCG CATGGACCAT
ATGGGAGACG AAGACTACGC TGTCATCGAT CACAACACCC AAGCTCTGCC AGAGCGTGTC
TACGAACACA ACAACCTTGA CGTTGATATT CAACGAGCAC TCAGTTCTTT GTCGCCTGAT
TACCGTGCCG CAGTCGTCTT GTGCGACATT GAAGGGCTAT CCTACGAAGA AATCGCCACG
ACTCTCGGTG TAAAACTTGG AACTGTGCGC TCCCGCATTC ACCGGGCACG TACGCAACTG
CGCCGAGAAC TTGAGCACCG AACTGTCCCC ACACCCGCGG AGGTGACGCA GTGA
|
|---|
| Protein sequence | MEPQPWEEIV RNHSARVYRL AYRLTGNQQD AEDLTQDVFV RVFRSLDTYE PGSFEGWLHR
ITTNLFLDSV RRQRRIRMDH MGDEDYAVID HNTQALPERV YEHNNLDVDI QRALSSLSPD
YRAAVVLCDI EGLSYEEIAT TLGVKLGTVR SRIHRARTQL RRELEHRTVP TPAEVTQ
|
|---|
| |