| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0793 |
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| Symbol | |
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| ID | 8379976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 853726 |
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| End bp | 855633 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003534 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_003160758 |
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| Protein GI | 256832031 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTGC GCTCCAACCT GCGCAATGTA GCGATCGTTG CCCACGTCGA CCACGGTAAA
ACTACCCTCG TCGACGCCAT GTTGCGTCAA GCCGGCGCCT TCGATCCCCG CGCGCAACTT
GAGGAGCGCG TCATGGACTC CGGCGACCTT GAACGTGAAA AGGGCATCAC AATCCTCGCC
AAAAACACCG CCATCCAATA CGCGGGCCCA GCAGCGCAGG CCGCCGGACA CGCAGATGGC
ATCACGATCA ACGTGATCGA CACCCCCGGC CACGCTGACT TCGGTGGTGA GGTAGAACGC
GGCCTGTCCA TGGTTGACGG CGTTGTGCTC CTTGTCGATT CCTCCGAAGG GCCGCTCCCA
CAAACTCGTT TTGTGCTGCG TAAAGCACTT GCCGCAAAAC TCCCCGTGAT CTTGGTGGTC
AACAAGGTAG ACCGCTCCGA TGCACGCATC GAAGAGGTCG TCTCTGAAGC AACGGATTTA
CTTCTCGGGC TTGCCTCAGA CCTTGCTGAG GAGATGGACC TCGACCTCGA GTCTGTCCTG
GATGTCCCCG TTGTGTACGC GGCAGCAAAA GCTGGCCGTG CCAGCATGGA GCAACCCGCT
GACGGAACTT TGCCGGACAA CGACAACCTC GAGCCACTGT TCGCGACCAT CATCGAAAAG
ATTCCAGCCC CCACCTACGA TGAAGCAACC CCACTGCAAG CGCACGTGAC GAACTTGGAC
GCGTCACCAT TCCTTGGGCG ACTGGCATTG CTGCGCATCC ACAATGGAAC TATTCGCAAA
GGTCAACAAG TCGCGTGGTG CCGCACCGAT GGTTCTATCC AGCAAGTGAA AGTCACTGAA
CTGTTGGAAA CCAAGGGTCT CGACCGCGAA CCGACCGAAT CTGCCGGTCC TGGTGATATT
GTTGCGGTCG CAGGAATCGC AGACATCATG ATCGGTGAAA CCCTCGCTGA CATCGACGAT
CCACGCCCAT TGCCCGTGAT CACAGTTGAC GACCCGGCGA TCTCCATGAC TGTGGGAATC
AACACCTCAC CATTGGCCGG AAAAGGCGGT AAAGGCCACA AAGTCACGGC CCGTCAAGTT
AAGGACCGCC TCGACTCAGA GCTAGTGGGT AACGTGTCGC TCCGGGTCCT GCCCACCGAA
CGCCCAGATG CGTGGGAAGT GCAAGGACGT GGTGAACTTG CTCTCGCAAT CCTGGTGGAA
CAGATGCGTC GTGAAGGCTT TGAACTCACT GTGGGTAAAC CACAAGTGGT GACCAAGAAG
ATCGACGGCA AAGTGCACGA ACCCATGGAA CGCATGACCA TTGACGTTCC AGAAGAATAC
CTCGGTGCAG TCACCCAGCT TATGGCGCAA CGCAAAGGGC GCATGGAAAC CATGACGAAC
CACGGTTCGG GCTGGGTGCG CATGGAATTT GTTGTTCCCG CCCGTGGTCT CATTGGGTTC
CGGACCCGAT TCCTCACCGA AACCCGCGGG ACAGGGATCG CCTCATCCAT CGCTGAAGGG
TACGAACCAT GGGCTGGACC CATTGAGACT CGCAACAACG GGTCACTTGT AGCCGACCGT
GCTGGTGCCG TCACCCCCTT TGCCATGATT AACCTCCAAG AACGCGGAAC ATTCTTTGTC
GACCCAACCC AAGAGGTCTA TGAAGGCATG GTCGTGGGAG AGAACTCCCG CAGCGAAGAC
ATGGACGTCA ACATCACCAA AGAAAAGAAA CTGACGAACA TGCGGTCCTC AACAGCCGAC
TCTTTTGAGA ACCTTGTGCC ACCACGCAAA CTCACGCTTG AAGAGTGCCT TGAGTTTGCA
CGCGAAGACG AATGCGTCGA AATCACCCCA GAGATCATCC GCATCCGTAA AGTGATCCTT
GACGCCACCG AACGTGCCCG GGCTACCGCC CGTGCGAAGC GCGCATAA
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| Protein sequence | MSVRSNLRNV AIVAHVDHGK TTLVDAMLRQ AGAFDPRAQL EERVMDSGDL EREKGITILA
KNTAIQYAGP AAQAAGHADG ITINVIDTPG HADFGGEVER GLSMVDGVVL LVDSSEGPLP
QTRFVLRKAL AAKLPVILVV NKVDRSDARI EEVVSEATDL LLGLASDLAE EMDLDLESVL
DVPVVYAAAK AGRASMEQPA DGTLPDNDNL EPLFATIIEK IPAPTYDEAT PLQAHVTNLD
ASPFLGRLAL LRIHNGTIRK GQQVAWCRTD GSIQQVKVTE LLETKGLDRE PTESAGPGDI
VAVAGIADIM IGETLADIDD PRPLPVITVD DPAISMTVGI NTSPLAGKGG KGHKVTARQV
KDRLDSELVG NVSLRVLPTE RPDAWEVQGR GELALAILVE QMRREGFELT VGKPQVVTKK
IDGKVHEPME RMTIDVPEEY LGAVTQLMAQ RKGRMETMTN HGSGWVRMEF VVPARGLIGF
RTRFLTETRG TGIASSIAEG YEPWAGPIET RNNGSLVADR AGAVTPFAMI NLQERGTFFV
DPTQEVYEGM VVGENSRSED MDVNITKEKK LTNMRSSTAD SFENLVPPRK LTLEECLEFA
REDECVEITP EIIRIRKVIL DATERARATA RAKRA
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