| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0785 |
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| Symbol | |
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| ID | 8379968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 840976 |
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| End bp | 842778 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003526 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003160750 |
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| Protein GI | 256832023 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATCA GGAAGATGGC TGCGCCTTTC GCAGTCCTCA TGAGCGCCTC GCTGGTGCTC
GCAGCCTGCG GTACGTCAGA AGAGCCAGAG CAGAACGAGA CGACCGGTGG CACCAACCAG
GGTGAAGCTG ACACCACCGG CAAAGTCGAC CTCGGCGATG TGACCACCAA AGAAGACACC
ATCTACTACT CGCTTGGTGG TGAAGAGTGG CTCGGCTTCA ACGGAAACAC CCCCGAGACC
TACTCAACCT ACAACTCGGT CATCAACGAA CGCCTCATCG AAGGCTTCAT GTACTACGGT
ACTGACGGCA CCGTGTACCA GAACGAACAG TTCGGTAACT TCCGCCTTGT CTCTGAAGAC
CCCATGGTTG TTGAGTACAC CATCAACGAC AACGTCACCT GGTCAGACGG CGAACCTGTT
GCCTACGAGG ACTACCTCCT CGAATGGGCT GCCCAGGCAA TCGCCGATGG TGAGGACGAA
GAGGGTAACC CGAAGCCACT GTTCAACCAC GTTGGTGGAC TTGACTTTGG TGGTCGTACC
CCTGCCGGTC CACAGGGCGA GCCTGGTGGC AAGACCTTCA CTTTCGAATA CGAAAACCCC
TACCCCGACT ACCAGCTCCA GGTGAACTTA GCGTTCCCAG CACACATTGT TGCTGAGCAA
GCAGGCATGA CCCTTGACGA GCTCGTTACC GCCATCCAGG ACAAGGATGT TGAGGCTCTT
CGTCCAGCTG CGAAGTTCTG GAATGAAGGT TGGCTCTCCC CCAACCCAGG TGAGCTTCCT
GACGAGGCTA TCGTCCCAGT GAACGGCCCC TACAAGTTGT CCTCATGGGA GCGCGGTCAG
TCCGTGACCC TGGAAGCCAA CGAGAACTAC TGGGGTACCC CGCCGGCAAC CAAGACGCTC
GTGTACCGCT TTGTTGCACC AGAGGCACAG GTTCAGGCGC TGCGTAATGG TGACCTGCAC
GTCATCGAAC CACAGGCCGA TGTGGACACT GTTGCTCAGA TCGGGCAGAT TGGTGACACC
GTCACCATGG CAACAGGTCA AAGCCTGACC TGGGAACACC TTGACTTCAA CTTCATCGAC
GGCAACGAAA TGGGTGCAAA CCTTGCCCTC CGTGAAGCAT TCGCCATGTG TGTTCCTCGT
CAAGACATCG TCGACAAGCT CATCAAGCCA GTTGACTCAG AGGCAGTTGT CATGAACGCT
CGCGAGGTGT TCCCCTTCCA AGCCAACTAC GACGAAGTTG TCTCCGAAGC ATATGACGGC
CGTTACGACG AGGTTGACAT CGACGGTGCA AAAGCAAAGC TCGCAGAAGC TGGCGTAGAA
ACACCATTCA CTGTTCGCCT TGGATACTCA CAGCCCAACG CACGCCGTGA CGCTGAGTTC
CAACTCATCC AAGAGTCCTG CAACAAGGCT GGATTCGACG TTCAGAATGT TGCCGGACCA
GACTTCTTCT CCAAGACCCT CCCCAACGGT GACTACGATG TAGCCATGTA CGCGTGGGCA
GGTTCAGGCC AGGTTGTCTC CGGTCAAAAC ATCTACTCGA CCAAGGGTCA GCAGAACTAC
GGTAAGTACT CCTCTGAAGC TATCGACATT GCATGGGAAG CACTCTCCTC CACCCTTGAC
ACCAGCCAGC AACTTGAGCA GGTCAAGGTC ATCGAGAAGA ACCTGTGGGA CGACCTCTAC
GGTATTCCAC TGTTCGCACA CCCAGGTGTT ACCGCATACG ACTCCAGCCT GCAAAACGTG
CGCCGCACAG CAACGCAGTC CACAGTCGCG TGGAACGCCG AGCAGTGGGT CCGCGCAGAG
TAA
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| Protein sequence | MKIRKMAAPF AVLMSASLVL AACGTSEEPE QNETTGGTNQ GEADTTGKVD LGDVTTKEDT
IYYSLGGEEW LGFNGNTPET YSTYNSVINE RLIEGFMYYG TDGTVYQNEQ FGNFRLVSED
PMVVEYTIND NVTWSDGEPV AYEDYLLEWA AQAIADGEDE EGNPKPLFNH VGGLDFGGRT
PAGPQGEPGG KTFTFEYENP YPDYQLQVNL AFPAHIVAEQ AGMTLDELVT AIQDKDVEAL
RPAAKFWNEG WLSPNPGELP DEAIVPVNGP YKLSSWERGQ SVTLEANENY WGTPPATKTL
VYRFVAPEAQ VQALRNGDLH VIEPQADVDT VAQIGQIGDT VTMATGQSLT WEHLDFNFID
GNEMGANLAL REAFAMCVPR QDIVDKLIKP VDSEAVVMNA REVFPFQANY DEVVSEAYDG
RYDEVDIDGA KAKLAEAGVE TPFTVRLGYS QPNARRDAEF QLIQESCNKA GFDVQNVAGP
DFFSKTLPNG DYDVAMYAWA GSGQVVSGQN IYSTKGQQNY GKYSSEAIDI AWEALSSTLD
TSQQLEQVKV IEKNLWDDLY GIPLFAHPGV TAYDSSLQNV RRTATQSTVA WNAEQWVRAE
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