| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0784 |
|---|
| Symbol | |
|---|
| ID | 8379967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 839530 |
|---|
| End bp | 840591 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003525 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003160749 |
|---|
| Protein GI | 256832022 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAG CACGGTATTA CGACCGCAAA GATATCCGGA TTGAAGACAT CGATGAGCCG
CAACTGCAAC CAGGTACGGT TGCCATTGAT GTGGCCTGGT GCGGGATTTG TGGAACAGAC
CTTCATGAGT ATCTTGAAGG TCCCATTTTC ATCCCGCCGA AAGGTAGCCC ACACCCGATC
TCTGGGGAAG AAGCCCCTAT CACGATGGGG CACGAATTCT CAGGGGTTGT GACCGCGCTG
GGGGAGGGGG TCACAGATGT GGCAGTGGGT GAGTCTGTTG TCGTGGAGCC GTACATTATC
CGGTCCGATG TGGACACAAC ACCGGGGCAG TCCTATCAAC TGTCGCCTGA CATGAACTTC
ATTGGGCTTG GGGGCCGCGG CGGTGGGCTC TCTGAGAAAA TCGTTGTGGA ACGCCGCTGG
GTTCATCCTG TTGGTGACAT TCCCCTTGAT CAGGCGGCAC TCATTGAACC ATTGGCAGTT
GGGCATCATG CGTTTGTGCG GTCAGCAGCA CAAGCGGGGG ACGTCGCGAT CGTGGGCGGG
GCTGGTCCCA TTGGGCTACT CACGGCTGCG GTGTTGAAGG CTAAAGGACT GACTGTTTAC
GTCTCTGAAG TGTCCACGGC CCGCAAGGAC AAGGCACGGT CAACGGGGGT GGCAGATGCG
GTGTTTGACC CTCGTGAGGT GGATGTCGCC GCTGAGGTGC GTGAATTGAC CGGTGGCCAT
GGCGCCGATG TGGGGTTTGA ATGTTCTTCG GTCCCGGTTG TTCTTGACAT GCTCATGGAT
GCGGTGCGCC CGGGCGGCGT CATCGTGAAC GTGTCTATTT GGGGTCACAA GCCTGAGGTG
GACCTCCCCG CGTTGGTGCT GAAGGAAATC GATCTGCGCG GAACGATCGG TTATGCGGGA
GATCACCCGG CCACCATCCA ACTCGTGCAA GAGGGCAAAG TGGACCTCGC TCCCTTTATT
ACTGCACGGA TTGGGTTAGA CGACTTGGTG GCGCAAGGTT TCACGCAACT TATTGAGAAC
AATGAGCACC ACGTCAAAAT CATTGTCAAT CCACGTGGGT AG
|
|---|
| Protein sequence | MKAARYYDRK DIRIEDIDEP QLQPGTVAID VAWCGICGTD LHEYLEGPIF IPPKGSPHPI
SGEEAPITMG HEFSGVVTAL GEGVTDVAVG ESVVVEPYII RSDVDTTPGQ SYQLSPDMNF
IGLGGRGGGL SEKIVVERRW VHPVGDIPLD QAALIEPLAV GHHAFVRSAA QAGDVAIVGG
AGPIGLLTAA VLKAKGLTVY VSEVSTARKD KARSTGVADA VFDPREVDVA AEVRELTGGH
GADVGFECSS VPVVLDMLMD AVRPGGVIVN VSIWGHKPEV DLPALVLKEI DLRGTIGYAG
DHPATIQLVQ EGKVDLAPFI TARIGLDDLV AQGFTQLIEN NEHHVKIIVN PRG
|
|---|
| |