| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0735 |
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| Symbol | |
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| ID | 8379920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 800547 |
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| End bp | 802418 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003478 |
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| Product | glycoside hydrolase family 6 |
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| Protein accession | YP_003160702 |
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| Protein GI | 256831975 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0698323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.806764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACCTC GCATGACGAC GCTGCGAAAG AATATCGCAG CCGCAACCGC AGGAATGGTG
CTAGCGGCCC CACTCGCAGT GACCGCTTTC ACCACCCCAG CCGTTGCCGC CGAAACTAAC
GTCGACAACC CATTTGTTGG AGCTGACTGG TACGTCAACC CGTACTGGAG CGACAACGTC
AACGAAGAAG CAGACTCCGT CCAGTCATCA GACCCAACCC TCGCCGCGAA GATGCGTGCA
ATTGCTGATG AACCGACAGC AGTGTGGATG GACCGTACCT CAGCAATCGA AGGGAATGTG
GACGGCCCGG GCCTTCGCTT CCACCTCGAT GAGGCGTTAG AACAAAAACA AGGCAATGAC
CCGATTGTCT TGCAACTCGT GATCTACAAC CTCCCAGGAC GTGACTGCTA CGCGCTCGCC
TCCAACGGAG AGTTGCCAGC CACGGCAGAG GGGCTTCGCA AGTACAAAGA AGAGTACATC
GACGCGATCA CCGAGATCCT CGCTGAGCCC AAATACCGTG ACCTGCGGAT CGTCACAACG
ATCGAGCCTG ACTCACTGCC GAACCTCACC ACCAACATGC ACGACCCCAA GTGTGTGGAA
GCGGAGCCTT ACTACAAAGA GGGTGTCGCT TACGCTCTGT CTGAACTTTC AGACATCCAA
GGGGTGTACA ACTACGTGGA TGCAGCCCAC TCCGGGTGGC TCGGTTGGGA AGACAACGCC
ACAGGGTCTG TACAAACCTT TACTGAAGTT GCCCAAATGA CCAACAAGGG CTTCGATTCC
ATCCACGGGT TCGTCACCAA CACAGCGAAC ACCACACCGT TGAACGAACC GTTCCTTCCC
GACCCAAGCA AGCAGGTCGG TGGACAACCC ATCCGTTCCT CGGACTACTA CGAGTGGAAC
ACCGCATTTG ACGAAGCAGA CTGGACAGCT GACCTGTACC GTCGCCTCGT CGCCGCGGGT
TTCCCCTCCG ACATCGGAAT GCTCGTTGAT ACCTCCCGCA ACGGGTGGGG TGGCCCAGAC
CGGCCCACCG CGGCAAGCAC CTCCTCCGAC CTCAACACCT ATGTTGACCA GTCTCGAGTG
GACCAACGCA CCCACCGTGG CGCATGGTGC AACGCTGCAG GAGCAGGAAT TGGGGAACGC
CCACAAGCTG CCCCCACTGA CTTCCCCAAC TCACACCTTG ACGCTTACGT GTGGGTGAAA
CCACCGGGTG AATCAGATGG TTCCTCCTCC GAAATCCCCA ACGATGAGGG CAAAGGCTTC
GACCGGATGT GCGACCCCAC ATTCAACTCG CCTAAGCTCA ACGGACTTCT CACTGGCGCT
TTGCCGAACG CACCTGTGTC CGGAAAGTGG TTCTCCGAGC AGTTCCAAGA ACTCGTTGCG
AACGCCTACC CAGTGATCGA CCCCGATGGT GTGGATCCTG ATCCTGAGCC AACGGACCCG
GACCCAGAGC CCACCGATCC TACCGATCCG GACCCTGACC CAACCGACCC GGACCCAGAA
CCCACCGATC CTACCGATCC GGACCCAGAA CCCACTGACC CAACCGACCC AGGTGAAGGT
GGCACATGCG ATGTCACTTA CACCACCAAC GACTGGAACA GTGGTTTCAC CGCAACAGTG
AAGATCACGA ACACCTCCAC CCAACCCATT AACGGCTGGA GCCTGGCGTT CACCTTCCCT
GCCGGTCAAC AGATCACCAA CCTGTGGTCC GCAACCAACA CATCAACAGG TTCCACAGCA
ACCATCACCA ACGCTGCCTG GAACCCCACC ATTAACGCAG GACAAACCGT GGAGTTCGGC
TTCAACGGAA CCCACAACGG GAACAACCCC GCACCCACCA GCTTCACACT GAACGGCGCA
ACCTGTTCCT AA
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| Protein sequence | MTPRMTTLRK NIAAATAGMV LAAPLAVTAF TTPAVAAETN VDNPFVGADW YVNPYWSDNV
NEEADSVQSS DPTLAAKMRA IADEPTAVWM DRTSAIEGNV DGPGLRFHLD EALEQKQGND
PIVLQLVIYN LPGRDCYALA SNGELPATAE GLRKYKEEYI DAITEILAEP KYRDLRIVTT
IEPDSLPNLT TNMHDPKCVE AEPYYKEGVA YALSELSDIQ GVYNYVDAAH SGWLGWEDNA
TGSVQTFTEV AQMTNKGFDS IHGFVTNTAN TTPLNEPFLP DPSKQVGGQP IRSSDYYEWN
TAFDEADWTA DLYRRLVAAG FPSDIGMLVD TSRNGWGGPD RPTAASTSSD LNTYVDQSRV
DQRTHRGAWC NAAGAGIGER PQAAPTDFPN SHLDAYVWVK PPGESDGSSS EIPNDEGKGF
DRMCDPTFNS PKLNGLLTGA LPNAPVSGKW FSEQFQELVA NAYPVIDPDG VDPDPEPTDP
DPEPTDPTDP DPDPTDPDPE PTDPTDPDPE PTDPTDPGEG GTCDVTYTTN DWNSGFTATV
KITNTSTQPI NGWSLAFTFP AGQQITNLWS ATNTSTGSTA TITNAAWNPT INAGQTVEFG
FNGTHNGNNP APTSFTLNGA TCS
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