| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0733 |
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| Symbol | |
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| ID | 8379918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 797269 |
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| End bp | 798735 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003476 |
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| Product | glycoside hydrolase family 10 |
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| Protein accession | YP_003160700 |
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| Protein GI | 256831973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0159525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC GCACTCTACT GGGCGCGCTG GCCCTGACCA CAGCTCTTGT GGTTCCTGGG
GCTATCGCCC AAGCAATTCC TCTCACCACC GCACCTGCAG GTGTGGGGCA CGACTACGAG
CCACTCCGTG ACGCCGCTGA ACGTTCCGGC CGCTACTTCG GTTTCGCATA CGCGCCTCAC
CTTGCCCAAC AGGACGCGAA CTATCGCGCC ATCGCAGAAC GCGAATTCTC GATGGTGACC
GCAGAAAACA CCATGAAGTG GGAATCAGTA CAGCCCTCCG AAGGCCAATT CAACTGGAGT
GGAGCTGACG CCGTCGTCGA CTTCGCCCAA GCGAATAACC AAGAAGTGTA CGGGCACACA
CTCGTGTGGC ATTCGCAATT GCCAGGGTGG GCGAGCAACA TTTCGGACCC AACCCGGCTG
AGCACCGTCA TGAAAGATCA CATCAACGCG GTGGCTGGAC GGTACAAGGG GGACATTGCG
TACTGGGATG TTGTCAACGA AGCATTTGAA GACAACGGCA CTCGACGTCA GTCGGTGTTC
CAACGCGTCC TGGGTGATGG GTACATTGAG GAGGCGTTCC GCGAGGCACG CAGCGCGGAC
CCGAACGCGA AGCTCTGCAT CAATGACTAT TCCACTGACG CCATCAATTC CAAGTCCACA
GCCATCTACA ACCTGGTCCG TGACTTCAAG GCACGTGGTG TTCCCATCGA CTGTGTTGGT
CTTCAGTCCC ACCTGATCGT GGGGCAGGTT CCTTCCACTT ACCAGCAGAA CATCCAACGA
TTTGTGGACC TGGGTGTGGA GGTTCGCATC ACCGAGCTCG ACATTCGCAT GAACACGCCT
GCGAGCCAAC AAAACATCGC ACAGCAAGCT CAGGACTACA AGAAAGTGTT TGAGGCTTGC
TGGGCTGTTG ATGGCTGTAA TGGTGTGACA ATTTGGGGTA TCTCTGACCA GTACTCCTGG
ATCCCTGATG TGTTCTCGGG CGAGGGCGCT GCTCTTCCGT GGAACAGCGA CTACTCAGTC
AAGCCTGCCC TTGCGGAACT TGCCCAGGTG ATGGGGGCAA CAACTGGTGG ATCGACGCCT
GACCCCACAG ACCCACCCAC TGATCCTACT GATCCTCCAA CTGACCCCAC CGACCCGCCT
ACTGATCCCA CACCGGGCGC TTGCGAGGTC ACTGCCAGTG TGAACTCGTG GAACTCAGGC
TACACGGCGA CGGTGACCAT TAAGAACACC AGTTCCCAGG CGATTAATGG GTGGGAACTG
ACAGCAGCGC TTCCAGCAGG GCACTCGTTG GCTCAGGGGT GGAATGCGGT GTACACGCAG
TCTGGGTCGA CCCTGTCGGC TCGGAACGTG GCGTGGAACT CGACCCTGGC TCCCGGGGCA
AGTGTGAGCA TCGGGTTTAA TGCCAACTTC CAAGGGTCTC TTGGCTCCTT GAGTGGCTTC
ACGCTGAACG GAGCGGCCTG CAACTAG
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| Protein sequence | MNKRTLLGAL ALTTALVVPG AIAQAIPLTT APAGVGHDYE PLRDAAERSG RYFGFAYAPH
LAQQDANYRA IAEREFSMVT AENTMKWESV QPSEGQFNWS GADAVVDFAQ ANNQEVYGHT
LVWHSQLPGW ASNISDPTRL STVMKDHINA VAGRYKGDIA YWDVVNEAFE DNGTRRQSVF
QRVLGDGYIE EAFREARSAD PNAKLCINDY STDAINSKST AIYNLVRDFK ARGVPIDCVG
LQSHLIVGQV PSTYQQNIQR FVDLGVEVRI TELDIRMNTP ASQQNIAQQA QDYKKVFEAC
WAVDGCNGVT IWGISDQYSW IPDVFSGEGA ALPWNSDYSV KPALAELAQV MGATTGGSTP
DPTDPPTDPT DPPTDPTDPP TDPTPGACEV TASVNSWNSG YTATVTIKNT SSQAINGWEL
TAALPAGHSL AQGWNAVYTQ SGSTLSARNV AWNSTLAPGA SVSIGFNANF QGSLGSLSGF
TLNGAACN
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