| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0732 |
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| Symbol | |
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| ID | 8379917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 795605 |
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| End bp | 797116 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003475 |
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| Product | glycoside hydrolase family 10 |
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| Protein accession | YP_003160699 |
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| Protein GI | 256831972 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.180847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGAT ACACACATCC ACCCCCATCG TGCTCGACTA CACAACGAGG GAGACTTGTG
AAGACACGTC GAACAGCAGC AACACTCATC GCGGCGTTGA GTGTTCTGGC TACCACAGCA
CTGGCCGCAC CCACCCAGGC AAGCCCACTC AATGCCGAGT TGCCCACCAG CCCAACAATC
ACCACTGCCA CCAAAGGAAT CGGCCACGAC TACGAGCCTC TTCGGGACGC AGCCGCCCGC
AAAGGAAAAA CCTTTGGTTT CGCTTACGCA CCACACATCG CAGCGCAAGA CAGCCAGTAC
AAGGCCATTG CTCAGCGCGA ATTTTCCATG GTCACCGCCG AAAACAACAT GAAGTGGGAC
GCAACCGAAC CACGACGTGG ACAATTCACC TTCAATGGCG CCGACGAGAT CATGTCGTTC
GCCAAGGCAA ACAACCAGAA AGTGTACGGG CACGCTCTGG TATGGCACTC ACAGATGCCA
AACTGGGCAA AGCAAATCAC CTCGCGCGAT GACATGCGAC GTGCAATGAA CGACCACATC
AAAGCAGTCG CAGGGCGCTA CAAAGGCCAA ATTGAGGCGT GGGACGTGGT CAACGAAGCC
TTCGAATGGA ACGGCACCCG CCGCCAATCC GAACTCCAGA AGGTCATGGG GGACTACTGG
ATTGAAGAGG CGTTCCGCAC GGCACGCGCA GCAGACCCGA ACGCGAAATT GTGCTACAAC
GACTACTCAA CGGACGGCAT CAACGCCAAA TCTGACGCCA TCTACCGCAT GGTCAAAGAC
TTCAAGTCCC GCGGAGTCCC CATCGACTGT GTCGGGTTCC AAACCCACTT GATTGTTGGC
GAACTGCCTG CAACCAACAA GCAGAACCTC CAGCGGTTTG CTGATCTTGG TGTGGACGTC
CGGATCACCG AACTCGACAT TCGCATCAAG CTTCCAGCTT CTCAACAGGA CCTCAACACC
CAAGCGCGCG AATACGGGCA AGTTGTGGAA AACTGCTTTG GCATCTCACG GTGCACCGGT
GTCACCATCT GGGGAATCAC CGACAAATAC TCATGGATCC CACAGGTCTC ACCAGGCTGG
AACGCCTCCC TTCCGTGGAA CGAGAACTAC ACAACAAAAC CAGCTCTCGC ATCGGTTGCT
CAAGCCATGG GCGCGAAGAG CGCCTCAGGT GGGGACAATG GTGGCACACC CGGCTTGACA
TGCGGGATCA GTGCCAAGGT TGGTGCGAAC TGGGGCAGCG GCTACACCAT GGACATTGTC
GTAGCCAACA AGGGAACGAC TCCCATCACC GACTGGACTT TCGCCACCAC CTTGCCGCAA
GGGCAAAAAC TCTCTACTGG CTGGTCGGGG ACCTATAGTC AAAACGGACA ACGCCTGACC
GTCACACCAG GGACGTGGAA CCGAACGATC GCCCCCGGAC AATCCGTTAG TTTCAACTTC
AACGTCGCAA AGAACGGAAA CGGCAGCACA GCATTGTCGA ACTTCACGAT CAACGGACAA
CACTGCCCAT AA
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| Protein sequence | MNRYTHPPPS CSTTQRGRLV KTRRTAATLI AALSVLATTA LAAPTQASPL NAELPTSPTI
TTATKGIGHD YEPLRDAAAR KGKTFGFAYA PHIAAQDSQY KAIAQREFSM VTAENNMKWD
ATEPRRGQFT FNGADEIMSF AKANNQKVYG HALVWHSQMP NWAKQITSRD DMRRAMNDHI
KAVAGRYKGQ IEAWDVVNEA FEWNGTRRQS ELQKVMGDYW IEEAFRTARA ADPNAKLCYN
DYSTDGINAK SDAIYRMVKD FKSRGVPIDC VGFQTHLIVG ELPATNKQNL QRFADLGVDV
RITELDIRIK LPASQQDLNT QAREYGQVVE NCFGISRCTG VTIWGITDKY SWIPQVSPGW
NASLPWNENY TTKPALASVA QAMGAKSASG GDNGGTPGLT CGISAKVGAN WGSGYTMDIV
VANKGTTPIT DWTFATTLPQ GQKLSTGWSG TYSQNGQRLT VTPGTWNRTI APGQSVSFNF
NVAKNGNGST ALSNFTINGQ HCP
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