| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0712 |
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| Symbol | |
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| ID | 8379897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 770596 |
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| End bp | 773907 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003453 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003160679 |
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| Protein GI | 256831952 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT TACCTCTCAG CGCCCGAGAT ATTGCACAAT TGCTGGATCT GCCTCACCCC
ACTGTGGAAC AACAAGCAAT CATTGAAGCT CCCCTTGAGT CCATGCTTGT GATTGCAGGG
GCGGGGTCGG GGAAAACGGA AACCATGTCA GCCCGGGTTG TCTGGCTGAT TGCCAATCAG
ATCATTGCTC CAGAACGAGT CCTCGGGTTG ACGTTCACTC GTAAGGCGGC CGGAGAACTG
ACTGAACGCA TCCGTGCCCG TCTGGCCCAC CTTGACCGTG TCGCCCCTGG GCTTACTTCC
CGGCGCATCG ACACCAACAA CGACAGACAC ACCACTGCTG ACACCCCACC AGCATTGAGC
GCCCTGGCGC GTCCCACGAT CTCCACCTAC AACTCCTATG CTGCCTCACT GGTCACCGAA
CACGGGTTAC GCATCGGCAG GGAACCCGGC GCCCGCCTCC TGACCGAAGC GAGCATCTGG
GCGATGGTGT CAGACATTGT TGACCACTGG CAAGAAGACC TTGACACGGA CTACGCCGTG
TCAACAATGA CCGATGCGGT GGTTACCCTC GCGGGAGAAC TCGCCGATCA TCTCCTCACA
GTGCCCGAGG CCGCAACCCA ACTCGATCAC CTACTGGAGA GCCTCGCAGA CCTCCCCTTA
GCTGGGCGAA GCCTCGCCCC CTCCGTTGCC AAGCTTGGGA AGCAACTCGC CACGAAACGG
CGCCTACTCG ACTTAGTCTC GGAGTATCAC CGGGTCAAAC GTCACTCAGA GTCCATGGAT
TTCTCAGACC AAGTGGTTCT GGCTGCTGAA CTTGCTCGTG ACCATCCGTT TGTCGCCGAC
ACAGAACGAC GACGTTTCGC TGTCGTATTA CTTGACGAAT ACCAAGACAC CTCGTACGCA
CAAATCCAGC TCCTCACCGC ACTCTTTGGT GATGGGCACC CGGTCACTGC AGTGGGGGAC
CCGAACCAAT CAATCTATGG GTGGCGCGGA GCCAGCGCCT CAGGGCTCAC CAGGTTCCCT
CGCGACTTTC CCCGCCCCAA CGGCACCCCT GCATCGATCG CTTCCCTGTC CACCTCGTGG
CGCAACGATG CACAGATCCT GTCGGCGGCT CACCGGATCG CGCTGCCTCT TGCGAGCGCC
TCCGCCCTGC CCCTACCCAC GTTGTCTACT CGACCTGGTG CTGGGACAGG AAGCGTCACC
GTGGGGTACT ACCTGTCAGC ACAAGACGAA GCACAAGGCA TTGCCGATTT CTTCACTCGC
CACTTCGTTC CAGGGATGAC CACTGCTGCA GTGTTGTGTC GAGCACGAAA ACAGTTTCCC
CTCCTTGAAG AAACTCTGCG GAACGCAGGC CTCCCCGTTG AAGTGGTGGG TTTGGGTGGG
CTCCTGCACA CCCCAGAAAT CCGTGACCTC GTCAGTATGC TTGAGGTAGT CCACGACCCA
TCCAGAGGAG ATTCCCTGAT GCGGTTACTG ACTGGACCAC GCTTCCACCT GGGGGCACAC
GACATCCACA CCCTCGGTGT GTGGGCACGC GAACTGAGTT CCCGGGCTCA CGGTTACAGC
GGCCCCCCGC GCGGAGCATT ACGTGAAGCA GCTGACGAAC GATCCATCGT GGACGCACTC
GCACAACTGC CCCCACGCTC GTGGCAGGGG CACCATGGCG AAACATTCAG CGAAGCAGGG
TATGAGCGGC TGACTCAACT CTCCGCACTG ATCGATGCAC TGCGCCAGCA AACCTATCTG
GCATTGCCCG AGTTTGTGGA CGCAACCGAG CGAGCATTGG GGCTTGACGT TGAGGTGGCG
CTACGGGCAG CGCATCGACA CGCGGAAACA GGGACCACGG ATCCGTCGGA CCCGTGGGGT
CGCGCGCACC TTGACGCTTT CCGTTCCGTG GTGACAGATT TTGTTCACCA AGCGGTGCAC
CCCACATTGG GTGCACTACT CGCATGGCTT GACGATGCCC GTGACCGAGA ACGTGGACTG
GACCGGCCAA CAGGACACCT CGACCCGCAC GCGATTCACC TCATTACGGT GCACGCAGCA
AAAGGGTTGG AATGGGACCT TGTGGCTGTC CCAGCGCTCA GCGACGGTGT TTTCCCCTCC
ACCGCGACGA CCACGCCGCG AGGCCCCACA GATTCTGGGT GGACCAGTCA CCTGGGTGCG
TTGCCATTTT CCCTTCGGGG AGATGCCCCT GATCTTCCCC ATCTCTCCCT CGCTGATGCT
GACCATGATG CGGAAATTGC GCGTCGACTC ACCGAGTTCA CGGCGCAGTG CGGGCACTAC
CAGGTTGCTG AAGAACGACG TCTTGCCTAT GTGGCGTACA CCCGTGCGCG CACTGCACTG
CTCGTCACAG GTGCCTGGTG GCGCACCGGG AAAACCGCGA CCCCACCCTC ACCATTCCTC
ACCGAACTCC TTGACATTGA CGGGGTTCAG ATTGCAGACC TCGTGACCGA ACCAGGAGAC
GACAACCCGC ACCCACCTGA CGGTGACACA GCAGTATGGC CACAATCGCT GGTTGACGAC
ATCACCAAGC GTGCTGCTGA CCTTGTCATG AGTACACGCC ACAACGGCAG ACCGATACTT
GACCACATCG GCCCGGTACA GGTCCACGGA GTTGACCTCG CGCAGCGAGC GCGACAGGTC
TTGAACGTCC AGCAGCGCCC GCGAGGCTCA TCAGTGATAT TCCCCGACCA CGTCAGCGTC
TCCGGGTTGG TGGAACTTTC CGCCGACCGC GAAGGTTTCC TCACCCAATA CCAGCGCCCC
ATTCCTCGCC AACCGTCGCC GCAATCACGA CGGGGAACAA CCTTCCACCT CTGGGTGGAA
CAGTTTTATG GGCACACCCC GCTGTTCGAC ATGGATGACC TCGATAACAC CAGCGACAGC
GACGACCATG GTACGGACCG CACACTTGAC GAACTGAAAG CGACATTTGA ACAGTCACGG
TGGGCACGGC TCACACCCAA GGAACTCGAA GCAGACATCG ACGTTGTCAT AGCTGGAGTG
GTTATTCGAG CTCGAATAGA CGCTGTCTTT GATGACCCTG ACCGCCCTGG CGGTGTCATC
GTCGTGGACT GGAAAACAGG GCGTGCCCCC ACAACCGATG CCGACCAGCG TCACCGTAAC
GTACAACTGG CGGTCTACCG TCTTGCGTGG GCAACATGGT CAGGGTGTGA CATCAACGAT
GTGACAGCAG CGTTCTACTA CGTGGCGCAG GACCTCACAG TGATCCCAGA CCAACTTCCA
GAAAGAGAGG AACTCGAACG TCTTGTGCGT CATGCCGGAA ACATCCAGGG TGTTGGCCCC
CAGGATCACT GA
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| Protein sequence | MTRLPLSARD IAQLLDLPHP TVEQQAIIEA PLESMLVIAG AGSGKTETMS ARVVWLIANQ
IIAPERVLGL TFTRKAAGEL TERIRARLAH LDRVAPGLTS RRIDTNNDRH TTADTPPALS
ALARPTISTY NSYAASLVTE HGLRIGREPG ARLLTEASIW AMVSDIVDHW QEDLDTDYAV
STMTDAVVTL AGELADHLLT VPEAATQLDH LLESLADLPL AGRSLAPSVA KLGKQLATKR
RLLDLVSEYH RVKRHSESMD FSDQVVLAAE LARDHPFVAD TERRRFAVVL LDEYQDTSYA
QIQLLTALFG DGHPVTAVGD PNQSIYGWRG ASASGLTRFP RDFPRPNGTP ASIASLSTSW
RNDAQILSAA HRIALPLASA SALPLPTLST RPGAGTGSVT VGYYLSAQDE AQGIADFFTR
HFVPGMTTAA VLCRARKQFP LLEETLRNAG LPVEVVGLGG LLHTPEIRDL VSMLEVVHDP
SRGDSLMRLL TGPRFHLGAH DIHTLGVWAR ELSSRAHGYS GPPRGALREA ADERSIVDAL
AQLPPRSWQG HHGETFSEAG YERLTQLSAL IDALRQQTYL ALPEFVDATE RALGLDVEVA
LRAAHRHAET GTTDPSDPWG RAHLDAFRSV VTDFVHQAVH PTLGALLAWL DDARDRERGL
DRPTGHLDPH AIHLITVHAA KGLEWDLVAV PALSDGVFPS TATTTPRGPT DSGWTSHLGA
LPFSLRGDAP DLPHLSLADA DHDAEIARRL TEFTAQCGHY QVAEERRLAY VAYTRARTAL
LVTGAWWRTG KTATPPSPFL TELLDIDGVQ IADLVTEPGD DNPHPPDGDT AVWPQSLVDD
ITKRAADLVM STRHNGRPIL DHIGPVQVHG VDLAQRARQV LNVQQRPRGS SVIFPDHVSV
SGLVELSADR EGFLTQYQRP IPRQPSPQSR RGTTFHLWVE QFYGHTPLFD MDDLDNTSDS
DDHGTDRTLD ELKATFEQSR WARLTPKELE ADIDVVIAGV VIRARIDAVF DDPDRPGGVI
VVDWKTGRAP TTDADQRHRN VQLAVYRLAW ATWSGCDIND VTAAFYYVAQ DLTVIPDQLP
EREELERLVR HAGNIQGVGP QDH
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