Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0707 |
Symbol | |
ID | 8379892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 763648 |
End bp | 765282 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003448 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003160674 |
Protein GI | 256831947 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGGCACC GCCCACGACG CACGACACGA GGCAAAGTGA CCACGTCTTC TCATACTGAA CTCACCACAT CATTCGCAGA CTTCCCCCTG CGTAGCGACA TCGTTGCTGC GCTCGCGTCA GCAGGAATTG TCTCACCGTT TCCCATCCAA TCGTTGACTC TGCCCGTCGC ATTGTCTGGA CACGACATTA TTGGGCAAGC GAAAACAGGA ACCGGGAAAA CCCTTGGTTT TGGGCTCCCT CTCCTCAACC GCGTTGTCGC CCCCGGAGAG GAAGGCTTCG ACCAACTCCC CGCCCCGGGC AAACCACAAG CTGTTGTCAT CGTCCCTACC CGCGAACTTG CCGTACAAGT GGCAAAAGAC TTGGAGTTGG CGTCATCCAC CCGATCCGTT CGGATCGTCC AACTCTATGG CGGGCGCGCA TACGAACCGC AGATCGCGGC GCTTAACCGG GGTGTTGAGG TCGTTGTTGG AACACCAGGC CGCATGATTG ACATGCTGAA ACAAAAGCAC CTCACCCTCC TTCGTGCCGG GGTGATCGTC CTTGATGAAG CAGACGAAAT GCTTGACCTA GGGTTCCTCC CCGATGTCGA GAAAATCCTC GCGCAAACAC CTGCTGTACG CCAAATGATG CTGTTCTCCG CAACGATGCC AGGCGCTGTA GTCGCCATGG CGCGGCGGTA CATGAACCAA CCCACACACA TCAGAGCCCA GGACCCCGAA GATTTGGGCT CCACGGTGAA GAACATCACC CAAGTGGTAT ATCGCGCACA CCCACTCGAC AAGGTCGAGA TGATTGCCCG TATTTTGCAA GCCCGAGGGC GCGGGTTGTC CGTCATCTTC ACCCGAACAA AACGCAACGC CGCAAAGGTA GCCGACGAAC TCACTGAACG AGGATTCGCT GCCGGTGCGT TGCACGGTGA CCTTGGGCAA GGAGCCCGCG AACAGGCACT CCGGGCGTTT CGGAACGGAA AAGTTGACGT CCTCGTGGCC ACAGACGTGG CAGCACGAGG AATTGACGTC GAGAATGTCA CCCACGTCAT TAACTATCAG GTCCCTGAAG ACGACAAGGT CTACCTTCAC CGTACTGGGC GCACAGGCCG GGCAGGAAAC AAAGGCACCG CCGTCACCTT CGTTGACTGG GAGGATCTGC ACACGTGGAC ACTCATCAAC AAAGCGCTCG GGTTAAACAT CCCAGAACCT GTTGAAACGT ACTCGTCCTC CCCACACCTG TTCACGGACC TCAACATTCC TGAAGGAACA AAAGGCCGAC TGCCCAAGGA CCGCCAAACC CGCGCAGGGC TTCAGGCAGA AGAACTCGAA GACGTGGGTG AAACAGGCCG TCGTACCCCA AAGAAGACGT CCACCCCCGC ATCGTCACAG CGCCGTACAG ACACAGCGTC ACGAGGCGAA CGGGACCGAC CAGCCCGCCA ACGCACCCGC CGCCGGGTCG CACCACGCAC CCAGCAGCAA GCAGGCGAAG CACCGCAGTC AACACCGACG ACTAACGCTG GCACATCGAG CACCGCGCCG CCTCAGGATC AGGCGGCGTC TGCGCAGCCA ACCCGCGAGC GTCGTCCACG GCAACGTCGT CGCCGCCGGT CAGATCAGGG TGAAGGCACA GAGTCATCAC GCTGA
|
Protein sequence | MWHRPRRTTR GKVTTSSHTE LTTSFADFPL RSDIVAALAS AGIVSPFPIQ SLTLPVALSG HDIIGQAKTG TGKTLGFGLP LLNRVVAPGE EGFDQLPAPG KPQAVVIVPT RELAVQVAKD LELASSTRSV RIVQLYGGRA YEPQIAALNR GVEVVVGTPG RMIDMLKQKH LTLLRAGVIV LDEADEMLDL GFLPDVEKIL AQTPAVRQMM LFSATMPGAV VAMARRYMNQ PTHIRAQDPE DLGSTVKNIT QVVYRAHPLD KVEMIARILQ ARGRGLSVIF TRTKRNAAKV ADELTERGFA AGALHGDLGQ GAREQALRAF RNGKVDVLVA TDVAARGIDV ENVTHVINYQ VPEDDKVYLH RTGRTGRAGN KGTAVTFVDW EDLHTWTLIN KALGLNIPEP VETYSSSPHL FTDLNIPEGT KGRLPKDRQT RAGLQAEELE DVGETGRRTP KKTSTPASSQ RRTDTASRGE RDRPARQRTR RRVAPRTQQQ AGEAPQSTPT TNAGTSSTAP PQDQAASAQP TRERRPRQRR RRRSDQGEGT ESSR
|
| |