Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0700 |
Symbol | |
ID | 8379885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 756914 |
End bp | 757459 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003441 |
Product | protein of unknown function DUF1003 |
Protein accession | YP_003160667 |
Protein GI | 256831940 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.496002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC GTCTCGACAC GCCACGTGAG GCCCGCCGCC CCTGGTGGAC ACGCCCAAAA ACACGCGGCA ATGAGGACTC CTTCGGACAC ATCGCCGAAG CGATCGCCCG TTTCATGGGC ACTCCCAAGT TCTTGTTTTA CATGACCGTG TTCTGTGCTG CATGGCTGAT CTGGAACTCG TGGGGTCCCA TTGACTTCCG CTTCGACAAA GCAGCAAACG GTTTCACTGC GCTGACGCTT ATGCTGTCAA TCCAGGCATC TTACTCAGCC CCACTCATTT TGCTTGCCCA AAATCGACAA GCAGACCGTG ATCGCGTCGC AGCAGAACAA GACCGGCAAC GCGCAGAAAG GAACCTGTCT GACACTGAGT ACTTGGCTCG TGAAATGGCA TCCCTGCGCA TCGCTATGGG GGAAGTTGCC ACGCGTGACT TTGTACGCTC CGAACTGCGA GTCATCGTCG AGGAATTGCA GCGCTCCGCC CACGACGCTG TTGCTGATCG TGACGATGAG CAACCCGAGG ACGATACACC CACCGACAGC GTGTAG
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Protein sequence | MAERLDTPRE ARRPWWTRPK TRGNEDSFGH IAEAIARFMG TPKFLFYMTV FCAAWLIWNS WGPIDFRFDK AANGFTALTL MLSIQASYSA PLILLAQNRQ ADRDRVAAEQ DRQRAERNLS DTEYLAREMA SLRIAMGEVA TRDFVRSELR VIVEELQRSA HDAVADRDDE QPEDDTPTDS V
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