Gene Jden_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0700 
Symbol 
ID8379885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp756914 
End bp757459 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content57% 
IMG OID645003441 
Productprotein of unknown function DUF1003 
Protein accessionYP_003160667 
Protein GI256831940 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.496002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC GTCTCGACAC GCCACGTGAG GCCCGCCGCC CCTGGTGGAC ACGCCCAAAA 
ACACGCGGCA ATGAGGACTC CTTCGGACAC ATCGCCGAAG CGATCGCCCG TTTCATGGGC
ACTCCCAAGT TCTTGTTTTA CATGACCGTG TTCTGTGCTG CATGGCTGAT CTGGAACTCG
TGGGGTCCCA TTGACTTCCG CTTCGACAAA GCAGCAAACG GTTTCACTGC GCTGACGCTT
ATGCTGTCAA TCCAGGCATC TTACTCAGCC CCACTCATTT TGCTTGCCCA AAATCGACAA
GCAGACCGTG ATCGCGTCGC AGCAGAACAA GACCGGCAAC GCGCAGAAAG GAACCTGTCT
GACACTGAGT ACTTGGCTCG TGAAATGGCA TCCCTGCGCA TCGCTATGGG GGAAGTTGCC
ACGCGTGACT TTGTACGCTC CGAACTGCGA GTCATCGTCG AGGAATTGCA GCGCTCCGCC
CACGACGCTG TTGCTGATCG TGACGATGAG CAACCCGAGG ACGATACACC CACCGACAGC
GTGTAG
 
Protein sequence
MAERLDTPRE ARRPWWTRPK TRGNEDSFGH IAEAIARFMG TPKFLFYMTV FCAAWLIWNS 
WGPIDFRFDK AANGFTALTL MLSIQASYSA PLILLAQNRQ ADRDRVAAEQ DRQRAERNLS
DTEYLAREMA SLRIAMGEVA TRDFVRSELR VIVEELQRSA HDAVADRDDE QPEDDTPTDS
V