Gene Jden_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0693 
Symbol 
ID8379878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp746291 
End bp747499 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content59% 
IMG OID645003434 
ProductROK family protein 
Protein accessionYP_003160660 
Protein GI256831933 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCAA AGCCGCCGAC GCCAGGGTCG CAGTCGTCGC TTCGCGAATC CAATCGGACG 
CGGATCATCG ACGCGATCAA GCAATTCGGC GGGCTCACCC AAGTGGAGCT CGCCGGTGCG
ACCGGGTTGT CGGCTGCCAC CGTGTCGAAC ATTGTCAAGG AGCTCACCAC TCTGGGGGTT
GTGCAAACCT CCCCCAGCAC CCGCAGTGGT CGGCGAGCAC AGCACGTCAC ATTGGCTCGA
ACACCTGGTT TAGTGGGTGC AGTCCAGTTT GGTTTACGCC ACATGCGGGT CGCGCTAGCT
GACTCGTCCG GGTCGCTGTT GTCGGATCAT CAACTACCTT TGGGTGCAGA CCACCGCGCT
GATGCCGGGC TCGATCGTGC CGCCTTACTC ATCGCGGACA TGATGGAAAC CTTCGATGCA
GAATCTGCGG AACTGCAGGG GGTTGCGGTC GCTTTACCCG CACCTGTTGA GCATTCTTCA
GGTCTCATCA CCTCGCCGGG AATCATGCGT GGGTGGGACA ACGTTGCTGT CGCCCACGTC
ATGAGTGAGC GCATCGGCAA ACCCGTGTAT GTGGCGAACT CCTCGAACAT GGGCGCTTTA
GGAGAACTGC GTCAGGGCGC TGCTGCAGGA GCCCAGCACA CGTTGTATAT CCAGGTGGGC
CAACGTATTG GCGCTGCGCT CATCATCAAC GGCGAGCTCT TTTGGGGGGC GAACGGTTCA
GCTGGCGAGT TCGGTCACAC AACGACTGAC CCCGACGGCC AAATCTGTCG ATGCGGTAAC
CGTGGTTGCC TAGAAACTGT TGCGGGTGGA AACGTTCTAC TTGAAGCGCT GCGCGTGTCT
CACGGTGTGA TGACGCTCAA AGATATGATG CGGTACGCGC GTGACGGTGA CCTCGGGTGT
ATTCGCGCCA TCGCAGACGC AGGTCGTGCA ATTGGGTTAG CTGCTGCGAA CCTGTGCAAT
GTGTTTAACC CAGAGCGCGT GGTGGTGGGC GGCGACCTCG CCCACACCGG CTCCATTTTG
CTTGATCCGC TGCGGGAAAC GATTGAACGT TTTTCGCTTC CCAGTACCGC TGAATGCATC
ACGATTGTGC CAGGTAGTTT GGGAGCAGAC GCCGAAATGA TCGGCACCAT TACCTACGCG
TTAGACCGCA GTGAAGCGTT CCATCGCTAT CCTGCCTCAC CGACAACCCA CTCCACGGAG
GACCAGTGA
 
Protein sequence
MNAKPPTPGS QSSLRESNRT RIIDAIKQFG GLTQVELAGA TGLSAATVSN IVKELTTLGV 
VQTSPSTRSG RRAQHVTLAR TPGLVGAVQF GLRHMRVALA DSSGSLLSDH QLPLGADHRA
DAGLDRAALL IADMMETFDA ESAELQGVAV ALPAPVEHSS GLITSPGIMR GWDNVAVAHV
MSERIGKPVY VANSSNMGAL GELRQGAAAG AQHTLYIQVG QRIGAALIIN GELFWGANGS
AGEFGHTTTD PDGQICRCGN RGCLETVAGG NVLLEALRVS HGVMTLKDMM RYARDGDLGC
IRAIADAGRA IGLAAANLCN VFNPERVVVG GDLAHTGSIL LDPLRETIER FSLPSTAECI
TIVPGSLGAD AEMIGTITYA LDRSEAFHRY PASPTTHSTE DQ