Gene Jden_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0688 
Symbol 
ID8379873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp741696 
End bp742679 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content57% 
IMG OID645003429 
Productmalate dehydrogenase 
Protein accessionYP_003160655 
Protein GI256831928 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01759] malate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACAC CGAAGACTGT AACTATTACC GGCGGCGCAG GGCAGATCGG GTACGCGTTA 
GCGTTTCGGA TTGCCAATGG GGAGGTGTAC GGATCAGATA CCCCGGTGTC TTTGCGGTTA
CTAGAAATCC CGCAAGCGTT GGGGGCGGCT GAGGGCGTCG CCATGGAGTT GATGGATTGT
GCGTTTCCTC TTCTTCACTC GGTTGAGGTT GTTGATGACA CGGTGGATGC TTTTGACGGG
GTGAGTGCGG CATTCCTTGT TGGAGCGAAA CCACGCCAAC AAGGAATGGA ACGTTCTGAT
CTACTGACGG CAAATGCGGG CATTTTTGTT CCTCAGGGGC GAGCAATCAA CGAGGGTGCT
GCGCCTGATG TGCGGGTTCT TGTCGTGGGC AATCCGGCCA ACACTAATGC GTGGATTACT
GCGATGAATG CGCCCGATGT TCCGCGCGAA CGGTTCACAG CAATGACTCG CCTGGACCAT
ACTCGTGCGG TGGCGCAGGT TGCTCGTCAC TTGGGTGTCG AGTCGTCGCG GCTCAGTCGT
CTCACGATTT GGGGTAATCA CTCTGCCTTG CAGTACCCGG ATATTTCGCA CGCCCAGATT
GATGGCAAAC CGTTGGGGGA CGCGGTGGAT TCCGAGTGGG CAACCGGTGA GTTTATGACG
ACTGTTGCGC AGCGCGGTGC GGCCATCATT AAGGCACGGG GGGCATCGTC TGCTGCATCT
GCTGCTAATG CCGCGGTGTG GCACATGCGT GATTGGGTGC AGGGAACTCC GGCAGGTGAC
TGGACCTCTG TGGCGTTGCC TTCTCCAGGG CTTTATGGGG TTCCGGACGG GCTTGTATCC
TCATTCCCTG CAGTCAGTGT GAATGGGCAG TGGGAAATCG TCGAGGGGTT GAGTATGTCA
CAGTTTTCGC AGCAACGTCT GGAGATGTCG GTGGCAGAAT TGGTGGCAGA GCAAGAATCG
GTGAAGCGTC TGGGAATTGG CTGA
 
Protein sequence
MATPKTVTIT GGAGQIGYAL AFRIANGEVY GSDTPVSLRL LEIPQALGAA EGVAMELMDC 
AFPLLHSVEV VDDTVDAFDG VSAAFLVGAK PRQQGMERSD LLTANAGIFV PQGRAINEGA
APDVRVLVVG NPANTNAWIT AMNAPDVPRE RFTAMTRLDH TRAVAQVARH LGVESSRLSR
LTIWGNHSAL QYPDISHAQI DGKPLGDAVD SEWATGEFMT TVAQRGAAII KARGASSAAS
AANAAVWHMR DWVQGTPAGD WTSVALPSPG LYGVPDGLVS SFPAVSVNGQ WEIVEGLSMS
QFSQQRLEMS VAELVAEQES VKRLGIG