Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0688 |
Symbol | |
ID | 8379873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 741696 |
End bp | 742679 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003429 |
Product | malate dehydrogenase |
Protein accession | YP_003160655 |
Protein GI | 256831928 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAACAC CGAAGACTGT AACTATTACC GGCGGCGCAG GGCAGATCGG GTACGCGTTA GCGTTTCGGA TTGCCAATGG GGAGGTGTAC GGATCAGATA CCCCGGTGTC TTTGCGGTTA CTAGAAATCC CGCAAGCGTT GGGGGCGGCT GAGGGCGTCG CCATGGAGTT GATGGATTGT GCGTTTCCTC TTCTTCACTC GGTTGAGGTT GTTGATGACA CGGTGGATGC TTTTGACGGG GTGAGTGCGG CATTCCTTGT TGGAGCGAAA CCACGCCAAC AAGGAATGGA ACGTTCTGAT CTACTGACGG CAAATGCGGG CATTTTTGTT CCTCAGGGGC GAGCAATCAA CGAGGGTGCT GCGCCTGATG TGCGGGTTCT TGTCGTGGGC AATCCGGCCA ACACTAATGC GTGGATTACT GCGATGAATG CGCCCGATGT TCCGCGCGAA CGGTTCACAG CAATGACTCG CCTGGACCAT ACTCGTGCGG TGGCGCAGGT TGCTCGTCAC TTGGGTGTCG AGTCGTCGCG GCTCAGTCGT CTCACGATTT GGGGTAATCA CTCTGCCTTG CAGTACCCGG ATATTTCGCA CGCCCAGATT GATGGCAAAC CGTTGGGGGA CGCGGTGGAT TCCGAGTGGG CAACCGGTGA GTTTATGACG ACTGTTGCGC AGCGCGGTGC GGCCATCATT AAGGCACGGG GGGCATCGTC TGCTGCATCT GCTGCTAATG CCGCGGTGTG GCACATGCGT GATTGGGTGC AGGGAACTCC GGCAGGTGAC TGGACCTCTG TGGCGTTGCC TTCTCCAGGG CTTTATGGGG TTCCGGACGG GCTTGTATCC TCATTCCCTG CAGTCAGTGT GAATGGGCAG TGGGAAATCG TCGAGGGGTT GAGTATGTCA CAGTTTTCGC AGCAACGTCT GGAGATGTCG GTGGCAGAAT TGGTGGCAGA GCAAGAATCG GTGAAGCGTC TGGGAATTGG CTGA
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Protein sequence | MATPKTVTIT GGAGQIGYAL AFRIANGEVY GSDTPVSLRL LEIPQALGAA EGVAMELMDC AFPLLHSVEV VDDTVDAFDG VSAAFLVGAK PRQQGMERSD LLTANAGIFV PQGRAINEGA APDVRVLVVG NPANTNAWIT AMNAPDVPRE RFTAMTRLDH TRAVAQVARH LGVESSRLSR LTIWGNHSAL QYPDISHAQI DGKPLGDAVD SEWATGEFMT TVAQRGAAII KARGASSAAS AANAAVWHMR DWVQGTPAGD WTSVALPSPG LYGVPDGLVS SFPAVSVNGQ WEIVEGLSMS QFSQQRLEMS VAELVAEQES VKRLGIG
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