| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0668 |
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| Symbol | |
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| ID | 8379853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 710150 |
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| End bp | 710806 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645003405 |
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| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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| Protein accession | YP_003160635 |
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| Protein GI | 256831908 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.858263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0276686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACT CGATCTGGAG TTGGGATGCA GCCATTGAGG TACTTCCACT CCTCCTTGAA
GCCTTTGTCA AAGTGACGCT CTATGTCACA CTCGTGTCCT CACTGATCGC CGCTGTTCTT
GGGCTTGTCC TTGCCATTGG TCGCCGCAGT GCCCCGCGGC CTATCGCGGT GGTGTTGACG
TTCATCTCTG ACTTCATCAG AATGACACCC ATTGTGGTGC AACTGCTTTT TGCTTACTAT
CTTTTCCTCG ATATGGAACC GATCACCATC GGGATCATCA TTTTTGGTAT TCACTACGCC
ACATACATGG CTGAGGTGTA CCGTGCAGGG ATTGATTCGG TTCCTCAAGG GCAATGGGAA
GCAACAACAG CTTTATCCAT GTCGAGGGCG AGAACCTGGA TAGCTGTCAT CATTCCTCAA
GCGGTTCGAG CAACGGTCCC CGCACTAGGG AACTATGTCA TTTCCATGTT CAAGGACACT
CCGTTCCTCA TTGCAATCAC CGTGACAGAA ATTGTGCGTG CCGCACAAAC TTATGGTGGA
AACCACTTCA CCTACATTGA AGCGATTACC TTGACGGGCG TCATTTTCCT TGCGTCTAGT
TACCCCACCT CGCTGCTCAT CAGCCGATTG GAGAAGCGCC TTGCCTACAC CAACTGA
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| Protein sequence | MNDSIWSWDA AIEVLPLLLE AFVKVTLYVT LVSSLIAAVL GLVLAIGRRS APRPIAVVLT
FISDFIRMTP IVVQLLFAYY LFLDMEPITI GIIIFGIHYA TYMAEVYRAG IDSVPQGQWE
ATTALSMSRA RTWIAVIIPQ AVRATVPALG NYVISMFKDT PFLIAITVTE IVRAAQTYGG
NHFTYIEAIT LTGVIFLASS YPTSLLISRL EKRLAYTN
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