| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0666 |
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| Symbol | |
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| ID | 8379851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 708355 |
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| End bp | 709419 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003403 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003160633 |
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| Protein GI | 256831906 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR02995] ectoine/hydroxyectoine ABC transporter solute-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0179646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATACTG CGGCCAACAA ACATGTCCGC ACATTGTATA CACAAGGACA GTCAGACGTT
AAGACTGTGC AAATGTCGTC GACCTGTGTA GTCTGGAACG CGGCCATCAC CAATTTCGGG
TCGGGTTGCC GGCTCAACGA GCCCGTGGTT CGCCCCGCAC AACCGAAAGA GGACACGATG
ACACGCACAA GAACACAGGT CGCAGCAGTG CTCGCAGCCG CCTCACTCCT CGCAGTGAGC
GCATGCTCCT CCGACGACGA CGCGAACGCT GACCAAGCAA CCTTGGATCG TCTGAAAGAC
GAAGGAACCA TCACTGTCGC CATCGCCGAC GAACGCCCAT ACTCTTGGGT CGAAGGCGAC
GAAGCGCGCG GCGCCACCAT CGCAATGCAC GAAGAAATCT TCGCAGGGAT GGGAATCGAC
AATGTCGAGG TTGTCGAAGT GGACTGGAAC TCACTGATCC CAGGATTGAA CGCAGGCCGC
TATGACGCCA TCAGCGCAGG GATGTCTATT CTTCCCGACC GTTGCGAACA AGCAGCTTTC
TCTGACCCTG AGATCATGTA CACCACTGGT CTGATGGTGC CCGAAGGTAA CCCCCAGGGC
TTGACTACTC TTGACTCTGT TGTCGAGGCC GGCGGAGATG TCCGTCTCGC CGTCCTTAAC
GGTGGAATCG AAGCTGGCTA CGCCGACGCC CTCGGAATTG AGGACGTCAC CTACGTCGAC
AACGCACAAG ACGGCATGGA CGTTGTGGCC AACGGGCGCG CTGACGCTTT CGCCATGACC
GCGATCTCAC TGAACTGGAT GGCACAGAAC AACCCCGACG TCGGAGTCGA AACAACCGAC
GCGTTCGTCC AAGTCATTGA TGGCGTTGAG CAGGTTGGTG CTGGTTCTAC CGTGTTCCGC
AAAGAAGACA CCGCACTTCT GGAGGCATAC AACGAGGAAC TCGCCACGAT CACCGGTGAC
TCTGCAGCCT ACCTCGACCT CGTTGGTGAA TACGGATTCA CCGAAGAGAA CCTTCCACCA
GCTGACCTCA CCACCGAGCA GCTGTGTGCC GGAGAGCTGG GCTGA
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| Protein sequence | MNTAANKHVR TLYTQGQSDV KTVQMSSTCV VWNAAITNFG SGCRLNEPVV RPAQPKEDTM
TRTRTQVAAV LAAASLLAVS ACSSDDDANA DQATLDRLKD EGTITVAIAD ERPYSWVEGD
EARGATIAMH EEIFAGMGID NVEVVEVDWN SLIPGLNAGR YDAISAGMSI LPDRCEQAAF
SDPEIMYTTG LMVPEGNPQG LTTLDSVVEA GGDVRLAVLN GGIEAGYADA LGIEDVTYVD
NAQDGMDVVA NGRADAFAMT AISLNWMAQN NPDVGVETTD AFVQVIDGVE QVGAGSTVFR
KEDTALLEAY NEELATITGD SAAYLDLVGE YGFTEENLPP ADLTTEQLCA GELG
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