Gene Jden_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0655 
Symbol 
ID8379840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp697402 
End bp698751 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content61% 
IMG OID645003392 
Productputative signal transduction histidine kinase 
Protein accessionYP_003160622 
Protein GI256831895 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.1704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGACG ATGCTCGTGT GAGTATGCCA TCCGCTGCGG TGCCCGCGGC CCCTGACCGA 
CTCCCACTGT TGCGCCCGCG ACGTGGCAGG CGTATCGCTG GTGTGTGTGC CGCACTGTCA
GCCCACCTGG GTGTGGACGT GCGGGTCATC AGGCTTGTCA TGATCGTGAC GAGCCTCATG
GGAGGGCTCG GGGCAGTCCT GTACTTATTC CTATGGATGA CCGTCCCGCC AGGTGACCCA
TGGGCCACAG CACGGGAACA CTCTCCCACC TCACGGGCAG TTCCCCCGCT GACCACAATG
GAAGCACCAA GCCCACCGTG GTGGGCTGCG ATCCCCATCA AAGATGTCGC CATCGGTGCA
GTACTTGTCA CCACCGCCGC TCTTCTCATT GCAGATCGAG CCGGTGTTCA TCTCCCCTGG
GGAGTGGTTC TTGCCGTTGT CGTCACAGTG ATTGGGTTAT TTCTTGCCTG GGGACAACTC
AACGAAACCC AACGAGGGCA ACTCGCCAAA CACGTCGGTG GACGAACCCC CACATCGATT
ATGCGCATCA CCGGTGGGAT AGCTCTTGTG GTTGTGGGGG TCGTGCTGCT CCTTGGCCAA
GAACGTGGTG GGACCATGCT CATGCCCGCT CTCGTGTCCG CCGTGGCTGT TCTTGTTGGG
GCTGGACTGG TATTAGCCCC ATGGTGGCTG CGCCTCATGC GTGACTTGGC CGATGAACGC
GCCAGTTCAG CACGAGCACG TGAACGTGCC GACATCGCCG CCCACCTGCA CGACTCAGTC
CTCCAAACCC TTGCCCTGAT CCAACGCAGC GCCCACCAAC CAGGCGAAGT CACCCGGCTG
GCACGGAACC AAGAACGCGA ACTACGCCAA TGGTTGTACG AAGACACTCC CCAAGAAGGA
ACCTCAGTAC AGGAAGACGC CCGTGCCCTG ATCGCCACCA TCGAAAATGA TATGACAGCG
GCACTAGGCG GACACGAACC TGTCACCATT GATGTTGTCA TCGTGGGGGA CACCCCACCA
GATGACACCT CCCACGCCAT GCTGCAAGCA CTCGGAGAAG GGGTCAAAAA CGCTGTCCGC
CACGGGCGTC CCCCCGTCAG CGTGTACCTG GAGATCTCTG ACCACACCAT GGACGGGTCT
GTCACCGACC GCGGCGATGG CTTCGACATC GACGCAATCC CTCACGATCG TTTTGGGGTG
CGAGAATCAA TCATTGGCCG GGTCGAACGC AGGGGTGGAA CCGCACAATA CAAACGTCGC
GCAGCGGGCG GAACAGAACT ACGCATCACC GTCCCCCGAA CTCCCACCCG TCCCTCACCA
CAATCCGCTC AATCCCCGGA GGCATCATGA
 
Protein sequence
MCDDARVSMP SAAVPAAPDR LPLLRPRRGR RIAGVCAALS AHLGVDVRVI RLVMIVTSLM 
GGLGAVLYLF LWMTVPPGDP WATAREHSPT SRAVPPLTTM EAPSPPWWAA IPIKDVAIGA
VLVTTAALLI ADRAGVHLPW GVVLAVVVTV IGLFLAWGQL NETQRGQLAK HVGGRTPTSI
MRITGGIALV VVGVVLLLGQ ERGGTMLMPA LVSAVAVLVG AGLVLAPWWL RLMRDLADER
ASSARARERA DIAAHLHDSV LQTLALIQRS AHQPGEVTRL ARNQERELRQ WLYEDTPQEG
TSVQEDARAL IATIENDMTA ALGGHEPVTI DVVIVGDTPP DDTSHAMLQA LGEGVKNAVR
HGRPPVSVYL EISDHTMDGS VTDRGDGFDI DAIPHDRFGV RESIIGRVER RGGTAQYKRR
AAGGTELRIT VPRTPTRPSP QSAQSPEAS