| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0626 |
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| Symbol | |
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| ID | 8379811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 665776 |
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| End bp | 667356 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645003363 |
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| Product | YjeF-family domain protein |
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| Protein accession | YP_003160593 |
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| Protein GI | 256831866 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000297999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGTGC GCGTTGCTGT GGTGGCGGTC GCGGTGCCTG GGGTGGGGCG TCACAATAGG
GACATGATTG TTGGTGTGAG TGCACGACAG ATGCAGGTGG CTGAGAAGCC GTTGTTGGAT
CGTGGGGTTG CGTTGATGGC GCGTGCATCG AGAGGTCTTG CGCAGTGTGT GGTGCAGGTT
GTGCGGCAGC GGTGTGGGCA GGTTGCTGGT GCGCGGGTTG TGGTGTTGGT GGGGCAGGGC
AATAACGGTG GTGATGCGTT GTTTGCTGCT GCGTTGCTGG CGCGCTTGCC GATGTCGGTG
ACGGTGGCGC TGGTGGGGGA GAGGTGCCAC GGTGACGGGT TGGCTGCGGT CCGTGCATCG
CAGGCGGTGG TGGTGACCCC CAGTGACGGT GCAGAGGTTG TTGCCCTGTG TGCGGGGGTG
GATGTGGTGG TGGATGGGAT TGTGGGCATT GGCGCTCGCG GTGCGGTGCG GGGGTTGGCT
GGTGATGCGT TGGCGTCGTG GTCGGCTCGT ACCAGGCGGG ATGGTGATCC TGTGTGGGTA
GCTGTGGATG TTCCTTCTGG TGTGGATGCA TCGTCTGGTG AGGTTGCCGA TGCGAGGCGC
ACGGTGCACG CGGATGTGAC GGTGACCTTT GGGGTGGCAA AGACGGGGCT GTTGGTTGCG
CCGGGGGCGT TGTCCGCGGG GCGGGTGCAG GTGGTGGATA TTGGCGTAGA TGTGGGTGAG
TGGGATGTGG TGAGTGTGGT TGGTGGTGAT CTTGGACCTG GTGGCTTGTG GGGGTGGTTG
TGGGAGTTGC CGGCAGCAAC TGACCACAAG TACACCCGGG GGGTGGTGGG GGTGGATGCG
GGGTCTGCTG TTTACCCGGG GGCTGGGGTG CTGGCGGCGC GTGCTGCTGC TGCGTGCGGT
GTGGGAATGG TTCGTTATGA GGGGGACCGG GAGGTCGCCG GGGTTGTGGC TTCGGTTGCG
CCGCATGTTG TGTCGGCCCG CGGGAGGGCG CAGGCGCGTG TGGTGGGGTC AGGGCAGGAA
CCTGACGATG CGGTGGCTGA GCGGGTCCGG CACGCGATGT CGGCGGGGGC GCCTACTGTG
CTTGATGCGG GTGCGTTGGG TGTTCTTGAC CGGTCGTTTG CGTTGAGTGA GCAAATGGTG
TTGACGCCGC ATGCCGGTGA GTTGGCGGGG CTGTTGATGG CCTTTGGTGT GGAGGTGACT
CGTGCGCAGG TGGAAGCGAG ACCGTTGTGG GCGGCGCGTT GTGCTGCGGA GGTGACGGGA
GCGACCGTGG TGCTGAAGGG GGTGACTCCG GTGATTGCTG GCCCGGGGGT TACGTACGTG
CAGCCCATTG AGGATGCGCG GGTGTCACGG TTGGCGACCG CTGGTTCAGG TGATGTGTTG
GCCGGTGTCT TAGGGGCAGC GTTGGCGCGG TTGGTGGCGG TGAAAGCAGA TGCTGTGGGT
GCGACGGATA TTGCAGGTGC AGTTGCGTGC GGGGTGTTGA CTCACCAGCT CGCTGCCCTT
CAGGGAGGTG ATGGGCCGTT GACAGCGAGT GACCTGGTTG CCCACATTCC GGCGGCGATT
GCGATGGTGT GTGCTTCGTG A
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| Protein sequence | MVVRVAVVAV AVPGVGRHNR DMIVGVSARQ MQVAEKPLLD RGVALMARAS RGLAQCVVQV
VRQRCGQVAG ARVVVLVGQG NNGGDALFAA ALLARLPMSV TVALVGERCH GDGLAAVRAS
QAVVVTPSDG AEVVALCAGV DVVVDGIVGI GARGAVRGLA GDALASWSAR TRRDGDPVWV
AVDVPSGVDA SSGEVADARR TVHADVTVTF GVAKTGLLVA PGALSAGRVQ VVDIGVDVGE
WDVVSVVGGD LGPGGLWGWL WELPAATDHK YTRGVVGVDA GSAVYPGAGV LAARAAAACG
VGMVRYEGDR EVAGVVASVA PHVVSARGRA QARVVGSGQE PDDAVAERVR HAMSAGAPTV
LDAGALGVLD RSFALSEQMV LTPHAGELAG LLMAFGVEVT RAQVEARPLW AARCAAEVTG
ATVVLKGVTP VIAGPGVTYV QPIEDARVSR LATAGSGDVL AGVLGAALAR LVAVKADAVG
ATDIAGAVAC GVLTHQLAAL QGGDGPLTAS DLVAHIPAAI AMVCAS
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