Gene Jden_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0617 
Symbol 
ID8379802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp657234 
End bp657677 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content58% 
IMG OID645003354 
Productribosomal protein L13 
Protein accessionYP_003160584 
Protein GI256831857 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTACGT ACACCCCGAA GCCAGGCGAC ATTCAACGTG ACTGGTACGT CATTGACGCC 
ACCGACGTTG TACTCGGTCG CCTCGCCAGC CACGTCGCTC AATTGCTCCG TGGCAAGCAC
AAGGCTACTT TTGCCCCCCA TGTCGACGGC GGTGACTTTG TCATTGTCAT CAACGCTGAC
AAGGTGGCTC TGAGCGGCAA CAAGCTTGAC CAGAAGAAGG CTTACCGGCA CTCCGGTTAC
CCAGGTGGTC TCACCGCGGT TCCTTACTCC GAACTCATGG AGAAGAACCC TGAACGTGCT
GTGGAGAAGG CCGTTCGCGG CATGATCCCT AAGACCAGCC TCGGCCGTGA GCAGATGACG
AAGCTTCGCG TTTACGCAGG CTCCGAACAC CCTCATGCTG CACAACAGCC GAAGACCTTC
GAGATTACCC AGATCGCGCA GTAG
 
Protein sequence
MRTYTPKPGD IQRDWYVIDA TDVVLGRLAS HVAQLLRGKH KATFAPHVDG GDFVIVINAD 
KVALSGNKLD QKKAYRHSGY PGGLTAVPYS ELMEKNPERA VEKAVRGMIP KTSLGREQMT
KLRVYAGSEH PHAAQQPKTF EITQIAQ