Gene Jden_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0602 
Symbol 
ID8379787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp647126 
End bp647665 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content57% 
IMG OID645003339 
Productribosomal protein L6 
Protein accessionYP_003160569 
Protein GI256831842 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.273648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTA TCGGTAAGCT TCCTATTCCG GTTCCCGCTG GTGTGGATGT CACGATCAAC 
GGAAACCTTG TCACGATCAA GGGATCAAAA GGCACGCTTG AGCACGTCAT CCCTGCACCC
ATCGAGGTTG CGCGGGCTGA AGACGGAACG ATCATCGTGT CACGCCCCAA CGACGAGCGT
CAGTCACGTG CCCTGCACGG TCTGACTCGC AGCCTGTTGG CCAACATCAT CACTGGTGTG
ACCCAGGGAT ACGAGAAGAA GCTCGAGATT GTTGGCACGG GTTACCGTGT GACCGCAAAG
GGTAAGGACC TTGAGTTCGC CCTTGGTTTC TCGCACCCGG TTGTCGTTAC TGCTCCTGAA
GGTATTACCT TCGCAGTCGA AGCTCCCACG AAGTTCTCCG TGTCGGGTAT CGACAAGCAG
CAGGTCAGCG AGGTCGCAGC GAACATCCGC AAGATTCGTA AGCCTGAGCC TTATAAGGGC
AAGGGTGTGC GCTACGCCGG CGAGAACATC CGCCGCAAGG CTGGAAAGGC TGGTAAGTAA
 
Protein sequence
MSRIGKLPIP VPAGVDVTIN GNLVTIKGSK GTLEHVIPAP IEVARAEDGT IIVSRPNDER 
QSRALHGLTR SLLANIITGV TQGYEKKLEI VGTGYRVTAK GKDLEFALGF SHPVVVTAPE
GITFAVEAPT KFSVSGIDKQ QVSEVAANIR KIRKPEPYKG KGVRYAGENI RRKAGKAGK