Gene Jden_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0584 
Symbol 
ID8379769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp635792 
End bp637891 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content55% 
IMG OID645003321 
Producttranslation elongation factor G 
Protein accessionYP_003160551 
Protein GI256831824 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.19852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.151402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTTG ACGTGCTGAC TGACCTAAAC AAGGTCCGCA ACATCGGCAT CATGGCGCAC 
ATCGATGCCG GAAAAACCAC TACGACCGAG CGCATCCTGT TCTACACAGG TGTGAACTAC
AAGCTCGGTG AAACCCACGA TGGCGCATCG ACGATGGACT GGATGGAGCA GGAACAGGAG
CGTGGTATTA CCATTACCTC AGCTGCGACC ACCTGCTACT GGAAAAACAA CCAGATCAAC
ATCATCGACA CCCCTGGGCA CGTTGACTTC ACCGTCGAGG TAGAGCGCTC ACTGCGTGTT
CTCGATGGGG CTGTCGCCGT GTTCGATGGT AAAGAGGGTG TTGAACCTCA GTCTGAGACT
GTATGGCGTC AAGCAGACAA GTACAACGTT CCACGTATTT GCTTCGTCAA CAAGATGGAC
AAGCTCGGCG CTGACTTCTA CTTCACTGTT CGCACTATCG TGGAACGCCT GAAGGCAAAG
CCGCTTGTCA TCCAGCTTCC TATCGGTTCA GAGAACGACT TCATCGGCAT GGTTGACGTC
ATCGAGCAGA AGGCGTACGT CTGGCACGGT GAAACCAAGC TCGGTGAGTC GTACGACATC
GAAGATGTGC CAGCAGACCT TCAGGACAAG CTTGAAGAGT ACCGTAACCA GCTCATCGAA
GATGTTGCTG AGTCTGACGA AGAGCTCATG GAGAAGTACC TCGGTGGCGA GGAACTGACC
GTTGCTGAAC TGAAGGCGGG TATCCGCAAG CTCACTGTCT CCGGTGAGGC GTTCCCTGTG
TTGTGTGGTT CTGCATTCAA GAACAAGGGT GTACAGCCCA TGCTTGATGC GGTGATTGAC
TACCTCCCAA CCCCTCTCGA CGTTGCGTCA GTGACTGGTA CCACGTTGAA CGAAGAGGAA
GAGCTGGTCC GTCACCCGGA TGCAAACGAG CCTTTCTCAG CTCTCGCATT CAAGGTCGCG
ACTCACCCCT TCTTTGGGAA GCTCACTTAT GTGCGCGTGT ACTCGGGTAA AGCCTCGTCC
GGCGCGCAGG TCATCAACTC AACAAAGGGC AAGAAAGAGC GCATTGGGAA ACTCTTCCAA
ATGCACTCCA ACAAAGAAAA CCCTGTTGAC GAAGCAACTG CCGGTCACAT CTACGCGTTT
ATCGGTTTGA AGGACGTCAC GACTGGTGAC ACCTTGTGTG ACCCACAGAA CCAGATCATC
CTTGAGTCGA TGACGTTCCC TGAGCCAGTG ATCGACGTGG CAATTGAGCC AAAGACTAAG
GCTGACCAGG AAAAGCTCTC GACAGCCATC CAGAAGCTTG CCGAGGAAGA CCCAACCTTC
CGTGTGAAGC TTGACGAAGA AACCGGTCAG ACCGTCATCG GTGGTATGGG TGAACTTCAC
CTGGATATTC TCGTTGACCG TATGCGCCGT GAGTTCCGAG TCGAAGCGAA CGTGGGTAAG
CCTCAGGTTG CCTACCGCGA GACCATTCGT CGTGCTGCTG AAAAGGTGGA ATACACCCAC
AAGAAGCAGA CAGGTGGATC TGGTCAGTTC GCGAAGGTGC TGGTCACCTT TGAGCCGCTA
GACACCGCTG AAGGTGAACT GTACGAGTTC GCCAATGAAG TCACCGGTGG CCGTATTCCA
CGTGAGTACA TCCCCAGTGT TGACGCAGGT ATCCAAGCTG GTCTTCAGCA GGGTGTCCTC
GCAGGCTTCC CCCTTGTCGG AGTGAAGGCC CGCCTTATTG ACGGTGCATA TCACGACGTC
GACTCGTCAG AAATGGCGTT CAAGATTGCC GGTACCATGG TGCTCCGCGA GGGCATCAAG
CGTGCCGATC CGGTACTACT CGAGCCAGTG ATGGCTGTCG AGGTGCGCAC ACCCGAGGAA
TACATGGGTG ATGTTATCGG TGACCTCAAC TCACGCCGTG GAATGATTCA GTCCATGGAA
GACGCTACCG GCGTCAAGGT TGTCCGCGCA CAAGTACCGT TGTCAGAGAT GTTCGGGTAC
ATTGGTGACC TGCGGTCGAA GACTCAGGGT CGTGCTGTGT ACTCGATGCA ATTCGACAGC
TACGCCGAGG TTCCTCGTGC AGTTGCCGAA GAGATCATCA AGAAGACCCG GGGCGAGTGA
 
Protein sequence
MALDVLTDLN KVRNIGIMAH IDAGKTTTTE RILFYTGVNY KLGETHDGAS TMDWMEQEQE 
RGITITSAAT TCYWKNNQIN IIDTPGHVDF TVEVERSLRV LDGAVAVFDG KEGVEPQSET
VWRQADKYNV PRICFVNKMD KLGADFYFTV RTIVERLKAK PLVIQLPIGS ENDFIGMVDV
IEQKAYVWHG ETKLGESYDI EDVPADLQDK LEEYRNQLIE DVAESDEELM EKYLGGEELT
VAELKAGIRK LTVSGEAFPV LCGSAFKNKG VQPMLDAVID YLPTPLDVAS VTGTTLNEEE
ELVRHPDANE PFSALAFKVA THPFFGKLTY VRVYSGKASS GAQVINSTKG KKERIGKLFQ
MHSNKENPVD EATAGHIYAF IGLKDVTTGD TLCDPQNQII LESMTFPEPV IDVAIEPKTK
ADQEKLSTAI QKLAEEDPTF RVKLDEETGQ TVIGGMGELH LDILVDRMRR EFRVEANVGK
PQVAYRETIR RAAEKVEYTH KKQTGGSGQF AKVLVTFEPL DTAEGELYEF ANEVTGGRIP
REYIPSVDAG IQAGLQQGVL AGFPLVGVKA RLIDGAYHDV DSSEMAFKIA GTMVLREGIK
RADPVLLEPV MAVEVRTPEE YMGDVIGDLN SRRGMIQSME DATGVKVVRA QVPLSEMFGY
IGDLRSKTQG RAVYSMQFDS YAEVPRAVAE EIIKKTRGE