Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0577 |
Symbol | |
ID | 8379762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 624311 |
End bp | 625021 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003314 |
Product | ribosomal protein L1 |
Protein accession | YP_003160544 |
Protein GI | 256831817 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0677262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00322479 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAACGC GCAGCAAGGC TTACACCAAG GCAGCGGAAA AGATTGACCG CTCCGCACTG TACAGCCCAC TTGAAGCAGT ACGTCTCGCA AAAGAGACAG CAAACACCAA GTTCGACGCC ACCGTTGAGG TTGTATTCCG CTTGGGTGTG GACCCACGAA AAGCAGACCA AATGGTCCGC GGAACCGTGA TCCTTCCCCA CGGAACTGGG AAGACCGCTC GGGTCCTGGT CTTCGCCACC GGTGACCGTG CTGAACAAGC ACGCGAAGCC GGCGCCGACA TCGTCGGTGG TGACGAACTC ATCCAGCAGG TCGCTGACGG ATTCACCGAC TTCGACGCTG CAGTTGCAAC CCCTGACCTC ATGGGGAAAG TGGGTCGCTT GGGCCGAGTC CTGGGTCCAC GCGGGCTCAT GCCAAACCCA AAGACCGGCA CAGTCACCAT GGATGTCGCA AAAGCAGTCA ATGACATCAA GGGCGGAAAG ATCGAGTTCC GTGTTGACAA GCACTCCAAC CTCCACTTCA TCATCGGGAA GGCTTCATTC TCCGAAGAGC AACTTGTGGA GAACTACGCA GCTGCAATCG ACGAGGTTCT CCGATTGAAG CCATCGTCGT CAAAGGGTCG CTACATCACG AAAGCAACCC TCACCACGAC AATGGGCCCC GGTATTCCTG TGGACCAGTC AAAGACCACA AAGCTGCTTG AAGAGAACTG A
|
Protein sequence | MATRSKAYTK AAEKIDRSAL YSPLEAVRLA KETANTKFDA TVEVVFRLGV DPRKADQMVR GTVILPHGTG KTARVLVFAT GDRAEQAREA GADIVGGDEL IQQVADGFTD FDAAVATPDL MGKVGRLGRV LGPRGLMPNP KTGTVTMDVA KAVNDIKGGK IEFRVDKHSN LHFIIGKASF SEEQLVENYA AAIDEVLRLK PSSSKGRYIT KATLTTTMGP GIPVDQSKTT KLLEEN
|
| |