Gene Jden_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0574 
Symbol 
ID8381744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp622398 
End bp622688 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content56% 
IMG OID645003311 
Productpreprotein translocase, SecE subunit 
Protein accessionYP_003160541 
Protein GI256831814 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.881053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0062556 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGATT CAGCGTCAGA CGCAGTCAAC GGCGACGCCA CGCGCACCCC ACAGGGGTCG 
TCGGGGTCCG CAAAGGCGAG CAACCGCACC AAGAAAAAGC CAAACATTTT CACACGGACG
GGCCGTTTCG TCCGTCAGGT CATCGCCGAA CTGAAAAAGG TTGTGACCCC TACCCGTAAA
CAGTACGGAC GCTATGTTGT GACCGTCATT GTGTTTGTGA TCGTCGTCAT GGCAATGGTT
CTGGTTCTCG ACTGGATCTT CAAAATGGGT GCCGACGTCA TCTTCGGCTG A
 
Protein sequence
MSDSASDAVN GDATRTPQGS SGSAKASNRT KKKPNIFTRT GRFVRQVIAE LKKVVTPTRK 
QYGRYVVTVI VFVIVVMAMV LVLDWIFKMG ADVIFG