| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0564 |
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| Symbol | |
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| ID | 8379749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 611139 |
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| End bp | 612383 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003299 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003160531 |
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| Protein GI | 256831804 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.432352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0264238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA CGAAACCCAC ACTCTCCACC GTGGCACGCC ACGCAGGAGT GTCCATCTCA
ACCGCATCTC TCGCCTTCTC CAACTCCGGA CCCATCGCCG AGGCCACCCG CACAAAAGTA
CTCCACGCAG CCCGCGAACT CGGCTACACC GGTCCCTCTG CGCTCGGACG ACAACTACGA
TCCGGAAAAA CCGGCATCGT GGGGGTTGTC ATTGGCGATG CAATACGGCG AGGCTTCCGT
GACCCGGTTC TCGTCTCCGC TCTGGACGGG CTCGTCAGAC GACTAGGCGA ACACGGCCTT
GGCGTTCTCC TCATTCCCGC TGACCACCCC ACAAACACCA CGGCACAGCA ACCCCATGAT
CACGTCCACC CCCTGATCCG TTCTACTGCC ATGGACGCAG CGATTCTCCT ATGGGGAGGA
CATGCTCACG ACCCGACCTA CCACGCCCTG GCCGAACGGC ACATCCCGAT CATCATTTCT
GAAGGTCAGC ACGTCGACGG ATCTTCCTAC ATCGAACTGG GAGACCGCGC CGCAATCACA
GCGCTGACCC AGCACCTTGT TGATCTTGGA CACACACGCA TTGCCTGCGT ATCACTATCG
CTCGGAGATG GACACCATGG GCTCACCCAC ATCCACGAAC TGACCGAACG CTACAATCAG
GCACTTACTC ACGCCAATAA CAACAACTCA AATACCACAC CAGCGCATGC TCGCACCCCT
CACCTTGCGG GCCGTCCCCC TTATGCTCTC CCCTCGTGGG GCCGTCTGCA CGGAATGCTT
GACGCAGGGG TCACACCAAC CCTGATCTGG GAGGCACAAG CTTCCCTTGT CGAAGAAGGA
CACCGAGCCG GCGCCGCTTT GCTGGACCCC ACCAACTACC CTGACGGTCA ACGCCCCACC
GCGATCATGG CACACTCAGA CCTTCTTGCG GCAGGAGTGC TCCAACAAGC ACGTGACATG
GGCTTTCGGG TCCCCGAAGA CCTTTCCATT ACCGGATTTG ATGGGGTGCA CCTTCCCTGG
CTCGCAGGGG AACAACTCAC CACTGCACGA CAACCACTAC CGGGCAAAGG GGAAGCTATC
GCACAAGCTG TCCTCGACGT CCTTGACAAC AACACTGTCA CCAGCCAACA CTTACCCGTA
CCACCAGTGC TTGGCGATAC AAGCGGCCCC GTCCCCACCA CACTGACGGA GCACAATAAA
CGCGACCACA ACAATTCCAC AAAAAACGAC ACGGCCACAT TGTGA
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| Protein sequence | MSTTKPTLST VARHAGVSIS TASLAFSNSG PIAEATRTKV LHAARELGYT GPSALGRQLR
SGKTGIVGVV IGDAIRRGFR DPVLVSALDG LVRRLGEHGL GVLLIPADHP TNTTAQQPHD
HVHPLIRSTA MDAAILLWGG HAHDPTYHAL AERHIPIIIS EGQHVDGSSY IELGDRAAIT
ALTQHLVDLG HTRIACVSLS LGDGHHGLTH IHELTERYNQ ALTHANNNNS NTTPAHARTP
HLAGRPPYAL PSWGRLHGML DAGVTPTLIW EAQASLVEEG HRAGAALLDP TNYPDGQRPT
AIMAHSDLLA AGVLQQARDM GFRVPEDLSI TGFDGVHLPW LAGEQLTTAR QPLPGKGEAI
AQAVLDVLDN NTVTSQHLPV PPVLGDTSGP VPTTLTEHNK RDHNNSTKND TATL
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