Gene Jden_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0561 
Symbol 
ID8379746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp608607 
End bp609104 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content54% 
IMG OID645003293 
Productprotein of unknown function DUF520 
Protein accessionYP_003160528 
Protein GI256831801 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.637028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.064143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT CCTCCATGGA CATCGTTTCG CGCGTCGATC GTCAGGAAGT CGACAATGCC 
CTGAACCAAG CAGCAAAAGA GATCTCCCAA CGCTACGACT TCAAGAACAC CGGCGCCACG
ATCTCATGGT CAGGCACCGA AAAAATCGTT CTCACGGCAA ACTCAGCCGA ACGAGTACTC
GCCATCCTCG ACGTGTTCCA AACAAAACTC ATCAAACGCG GCGTTTCCCT CAAAGCTTTC
GACACGGACG ACAAAGAACC CCAAGCGTCC GGCAAAGAGT ACCGCCTCGA AGGGATCCTC
AAAGAAGGAC TCGCAGGCGA CCGAGCCAAA AAAGTCACCA AGATTATCCG TGAAGAAGGT
CCAAAGGGCG TGAAAACCCA GATCACCGGC GATGAAGTCC GCGCCACCTC GAAATCACGC
GATGACCTCC AGGCAGTACA AACACTCCTG CGTGAATCAG ACCTCGACTT CGCCGTGCAA
TTCACGAACT ACCGCTGA
 
Protein sequence
MADSSMDIVS RVDRQEVDNA LNQAAKEISQ RYDFKNTGAT ISWSGTEKIV LTANSAERVL 
AILDVFQTKL IKRGVSLKAF DTDDKEPQAS GKEYRLEGIL KEGLAGDRAK KVTKIIREEG
PKGVKTQITG DEVRATSKSR DDLQAVQTLL RESDLDFAVQ FTNYR