Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0561 |
Symbol | |
ID | 8379746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 608607 |
End bp | 609104 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645003293 |
Product | protein of unknown function DUF520 |
Protein accession | YP_003160528 |
Protein GI | 256831801 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.637028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.064143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGATT CCTCCATGGA CATCGTTTCG CGCGTCGATC GTCAGGAAGT CGACAATGCC CTGAACCAAG CAGCAAAAGA GATCTCCCAA CGCTACGACT TCAAGAACAC CGGCGCCACG ATCTCATGGT CAGGCACCGA AAAAATCGTT CTCACGGCAA ACTCAGCCGA ACGAGTACTC GCCATCCTCG ACGTGTTCCA AACAAAACTC ATCAAACGCG GCGTTTCCCT CAAAGCTTTC GACACGGACG ACAAAGAACC CCAAGCGTCC GGCAAAGAGT ACCGCCTCGA AGGGATCCTC AAAGAAGGAC TCGCAGGCGA CCGAGCCAAA AAAGTCACCA AGATTATCCG TGAAGAAGGT CCAAAGGGCG TGAAAACCCA GATCACCGGC GATGAAGTCC GCGCCACCTC GAAATCACGC GATGACCTCC AGGCAGTACA AACACTCCTG CGTGAATCAG ACCTCGACTT CGCCGTGCAA TTCACGAACT ACCGCTGA
|
Protein sequence | MADSSMDIVS RVDRQEVDNA LNQAAKEISQ RYDFKNTGAT ISWSGTEKIV LTANSAERVL AILDVFQTKL IKRGVSLKAF DTDDKEPQAS GKEYRLEGIL KEGLAGDRAK KVTKIIREEG PKGVKTQITG DEVRATSKSR DDLQAVQTLL RESDLDFAVQ FTNYR
|
| |