| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0560 |
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| Symbol | |
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| ID | 8379745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 607806 |
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| End bp | 608603 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645003292 |
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| Product | HAD-superfamily hydrolase, subfamily IIB |
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| Protein accession | YP_003160527 |
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| Protein GI | 256831800 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.111062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACCCG CCATCGTCGC CACAGACCTG GACGGAACGC TCTTACGACC CGACCTCAGC
GTCTCGCGGT TCACCCGCCG CGTCCTCCAA CAACTGGAGG ACCACGGTGT CCAGATCATT
TTTGTCACCG CACGACCCCC ACGATGGATG GCACCACTAG AACAGATCGC CCCGGCCCAC
GGCCGGGCGA TCTGTCTCAA CGGGGCGCTC ATGTGGAACT TCACCACCCA CACCGCCACC
CGGATACGCG GTTTCACCCA CGGCGAGGTG CAGCGCATCG TCACAGATCT CCGCGAAGCG
ATCCCCGGAA TCGCGCTTGG CGCAGAACGA CACACTGGAG TCGTCTTCGA CCCCCACTTC
GTATCCCAAC ACCCACACGG ACCCCACACA CGCTGGGCAT TCATCGAAAC AATGGTCGAT
GTCCCAGTAG GAAAACTCCT CGCCCAAGCA CCACATCTCG ATGACACAAC CTTCTTCACA
CAGGTGCACA ATGTCCTCGA CGACCGCGCC CTCCTCGCCT TCTCCGGCGC GGGAGGCCTC
GCCGAAATGA CCGCCCCAGG AGTCACCAAA GCCGCCGCAC TCGCACAGTG GGCCGCCGAC
CACAACGTCC CCGCATCTCA AGTCATCGCC TTCGGTGACA TGCCCAACGA CCTCCCCATG
CTCACCTGGG CAGGAACTGG AATCGCCGTG GCCAACGCAC ACCCCGATGT GCTCCACCAC
GCTGACGGAC ACGCCCTGGC ACACCACGAC GATGGAGTCG CCCGGTATCT TGCCGAACTC
TACAACCTCC ACGTGTAA
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| Protein sequence | MLPAIVATDL DGTLLRPDLS VSRFTRRVLQ QLEDHGVQII FVTARPPRWM APLEQIAPAH
GRAICLNGAL MWNFTTHTAT RIRGFTHGEV QRIVTDLREA IPGIALGAER HTGVVFDPHF
VSQHPHGPHT RWAFIETMVD VPVGKLLAQA PHLDDTTFFT QVHNVLDDRA LLAFSGAGGL
AEMTAPGVTK AAALAQWAAD HNVPASQVIA FGDMPNDLPM LTWAGTGIAV ANAHPDVLHH
ADGHALAHHD DGVARYLAEL YNLHV
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