Gene Jden_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0558 
Symbol 
ID8379743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp605654 
End bp606511 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content57% 
IMG OID645003290 
Productpeptidase M48 Ste24p 
Protein accessionYP_003160525 
Protein GI256831798 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.363188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCATC GGCATCTCAA CGGGGTAAAG ACCGCTGCAT TATTTGGCGT GATGTGGGCG 
CTGTTGTTGG GTTTGTGGTA TCTCGTTGCT GGCGATTCTC CTGGCCTTTT GCTGCTTTTC
AGTGCTTTTG GTTTGGCGAT GACGTTTTAC ACATTTTGGA ACTCTGACAA GTTAGCGATT
CGATCCATGC ACGCCCGCCC GGTCTCAGAA CTTGAGGCTC TAGCGATGTA TCGGATTGTG
CGTGAGTTGT CGACGGCTGC TCGCCAGCCG ATGCCTCGCT TGTATGTGTC GCCCACAATG
AGCCCTAATG CTTTTGCGAC CGGGCGCAGT CCGCGCCATG CCGCGGTGTG TTGCACGGAG
GGGCTCTTGG CGATGTTGGA TGAGCGAGAA CTTCGGGGGG TGCTGGGCCA TGAACTCATG
CACGTGTACA ACCGTGACAT TTTGACGTCA TCGGTGGCGG CTGCGATTGC CGGGGTTATT
TCTTCGGTGG CGAATCTTTT GTTCTTTTTT GGTGGGTCAG ACCGTGACCG CAACCCGTTG
CTTGCTCTGG CCACAATGAT TGTGGCGCCC GTTGCTGCCA CTGTCATTCA GTTAGCTATC
TCGCGTACTC GCGAGTATGA CGCAGACCAG GACGGGGCGC GTTTGACGGG GGATCCGTTG
GCGTTGGCTT CGGCGCTGCG GAAACTTGAG GCCGGCACGG CGCGGGCTCC GTTGCCGGCG
ACCCAAGATC TTGCTGATGT GTCGCACCTG ATGATTGCCA ATCCTTTTCG GGCTGGTGGG
ATAGCGTCTT TGTTCGCTAC GCACCCTCCC ATGAATCAAC GGATCGCCCG TCTAGAAGCT
ATGGCGGGAC GTTTCTGA
 
Protein sequence
MGHRHLNGVK TAALFGVMWA LLLGLWYLVA GDSPGLLLLF SAFGLAMTFY TFWNSDKLAI 
RSMHARPVSE LEALAMYRIV RELSTAARQP MPRLYVSPTM SPNAFATGRS PRHAAVCCTE
GLLAMLDERE LRGVLGHELM HVYNRDILTS SVAAAIAGVI SSVANLLFFF GGSDRDRNPL
LALATMIVAP VAATVIQLAI SRTREYDADQ DGARLTGDPL ALASALRKLE AGTARAPLPA
TQDLADVSHL MIANPFRAGG IASLFATHPP MNQRIARLEA MAGRF