| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0550 |
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| Symbol | |
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| ID | 8379735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 594878 |
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| End bp | 596788 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003282 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_003160517 |
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| Protein GI | 256831790 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.297459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.844264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATG CTGCCTGGCT CCTTATCGCC ATTCCGCTGC TGAGTGCCGC ATTTCTTCTT
CTGTCCGGTC GCCGAAGCGA CCGTTGGGGA CATTGGATTG GTGTGTGTGC CTCTGGAGCG
GCGTTCGTGG TAGGCGCTGT GATCCTTGTT GATCTGCTTG GTCGTGATGC AGGGGACCGG
GTGCATGATG TGCACCTGTT CGACTGGATT TCGGCCGGTG ACTTGGTTGT TCATGCTGGA
TTACGGATCG ATCCGCTGTC CATGACGTTC GTCATGCTGG TCACCTGTGT TGGTTCGCTC
ATTCACGTGT ACTCAGTGGC GTACATGGAG CATGACGCTG ACCGGCGCCG ATTCTTCGCT
TACTTGAACC TCTTTGTTGC CGCGATGCTC ATCCTCGTGC TTGCGGACTC CTACCTGCTG
TTGTTTGTTG GGTGGGAAGG CGTGGGGTTA GCGTCCTACC TGTTGATCGG TTTCTGGAAC
CACGTGCCGC AGTACGCCAC TGCTGCGAAG AAAGCATTCA TCATGAACCG TGTCGCTGAC
GTGGGCATGA TTGTTGCTCT TGGCGCACTG TTCAGCACAT TTGGTGCACT TGATTTTGCG
ACTGTGGAAC AAGCCGCTGG CACCGCCAGC GAACCCATCA TGACGCTCAT CGGGTTGATG
CTTCTTGTGG CTGCGTGCGG TAAGTCGGCG CAATTCCCCC TGCAAGCCTG GCTTGGCGAT
GCGATGGCTG GTCCGACCCC CGTGTCTGCG TTGATTCACG CGGCCACGAT GGTGACAGCT
GGTGTGTACC TCATTGTGCG GTCCGGGCCC GTATACGAGC AGGCGCCAAC AGCGCTGTTG
GTTGTTGCCC TGATTGGGGC GATCACGTTG TTGTTCGGGG CGATTGTGGG GTGCGCAAAA
GACGACATCA AGAAGGCGCT TGCTGCGTCA ACCATGTCCC AGATCGGGTA CATGATGCTG
GCTGCTGGGC TTGGGCCCAT TGGTTACGCC TTCGCGATCT TCCACTTGCT TACTCACGGG
TTCTTTAAGG CAGGAATGTT CTTGGGGGCG GGGTCAGTCA TGCATGGCAT GAATGACGAT
GTCAACATGC GCCACTACGG GAATCTGTCG CGCTTCATGA AGGTCACCTG GATTACCTTC
GGGCTCGGGT GGCTCGCGAT TCTTGGGGTG CCACCATTTT CTGGTTTCTG GTCGAAAGAC
AAGATCATTG AAGCGGCGTT CTCAGCAGAT CACGGTCATG GTTGGCAGCC GTGGGTCTTT
GGTTTGGTTG CCCTCTTTGG TGCAGGGCTG ACCGCGTTCT ACATGTCACG GTTGTTCTTC
ATGACCTTCC ATGGCAAGGC ACGGTGGGCC ACTGAGGAGT CCAGCCCGCT TCCCCAACGT
CACCCTCATG AATCGCCACG GCTGATGACG GTCCCCATGA TCATCCTTGC CCTCGGCTCA
GCTGGTCTCG GCTTGTTCTT GGCGTTGGGT GATGGTTTTG TCACGTGGTT GGAACCCACC
ACGGGTGTAC TTGAGCACCA TGAACCAGTG CTACCGATCC CCGTCATCAT GATCTCCACT
CTTGTTGTGG TGTTTGTGGG AGCGGCTCTC GCTTGGCGGC AGTATGGTGC ATCTGATGTG
CCTACGACGC CGCCTATCGG GTCACCACTG ACACGGGCAG CCCGCCGTGA CCTGTACCAA
GACGATGTCA ACGAGGCGCT GATCATGCGT CCAGGTCAGT ACGCAACACG GACCCTTGTG
TACGCGGATA AGAAGGTTCT CGACAACGCT GTGACGGGAA CAGCTGGACT TGTTGGCTCC
TTCGGGTTGC TCTTGCGCAA GCTTCAGAAC GGACACGTGC GCACATACGC TGCGTACATC
ATCATCGGCC TCGTCGCGAT GCTTCTTGCC CTCGCGCCGT GGTGGAACTG A
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| Protein sequence | MIDAAWLLIA IPLLSAAFLL LSGRRSDRWG HWIGVCASGA AFVVGAVILV DLLGRDAGDR
VHDVHLFDWI SAGDLVVHAG LRIDPLSMTF VMLVTCVGSL IHVYSVAYME HDADRRRFFA
YLNLFVAAML ILVLADSYLL LFVGWEGVGL ASYLLIGFWN HVPQYATAAK KAFIMNRVAD
VGMIVALGAL FSTFGALDFA TVEQAAGTAS EPIMTLIGLM LLVAACGKSA QFPLQAWLGD
AMAGPTPVSA LIHAATMVTA GVYLIVRSGP VYEQAPTALL VVALIGAITL LFGAIVGCAK
DDIKKALAAS TMSQIGYMML AAGLGPIGYA FAIFHLLTHG FFKAGMFLGA GSVMHGMNDD
VNMRHYGNLS RFMKVTWITF GLGWLAILGV PPFSGFWSKD KIIEAAFSAD HGHGWQPWVF
GLVALFGAGL TAFYMSRLFF MTFHGKARWA TEESSPLPQR HPHESPRLMT VPMIILALGS
AGLGLFLALG DGFVTWLEPT TGVLEHHEPV LPIPVIMIST LVVVFVGAAL AWRQYGASDV
PTTPPIGSPL TRAARRDLYQ DDVNEALIMR PGQYATRTLV YADKKVLDNA VTGTAGLVGS
FGLLLRKLQN GHVRTYAAYI IIGLVAMLLA LAPWWN
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