Gene Jden_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0539 
Symbol 
ID8379724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp583928 
End bp584290 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content56% 
IMG OID645003271 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_003160506 
Protein GI256831779 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.970594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.540289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC CCTACGTCCC GCTTCTCATC CTCATGGGCA TTGCCCTGAT CTTGGCTATC 
GGTGGGGTGG TAGCGAGCGC TCTCATCGGC CCAAAGAAAT ACAACAAAGC CAAACTAGAA
GCCTATGAAT GCGGGATCCA GCCCACACCG CACGCCGCAG AAGGTGGGAA ATTCCCTGTC
AAGTACTACC TCGTGGCAAT GACCTTCATC GTTTTCGACA TCGAAATCAT CTTCCTCTAC
CCGTGGGCCG TCGACTTCGC GCACCTGGCA ACCTTTGGTG TCGTCGCGAT GCTCTCCTTC
CTCGCCCTGA TCACCGTGCC ATTCTTGTAC GAGTGGCGCC GTGGCGGATT CGACTGGGCT
TAA
 
Protein sequence
MTNPYVPLLI LMGIALILAI GGVVASALIG PKKYNKAKLE AYECGIQPTP HAAEGGKFPV 
KYYLVAMTFI VFDIEIIFLY PWAVDFAHLA TFGVVAMLSF LALITVPFLY EWRRGGFDWA