| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0538 |
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| Symbol | |
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| ID | 8379723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 581860 |
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| End bp | 583200 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003270 |
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| Product | glycoside hydrolase family 6 |
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| Protein accession | YP_003160505 |
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| Protein GI | 256831778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.448554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAGC GCACGACATC GCTCCTCACC ACAGCAGCAC TTGTGGGAGC AGGACTCATC
CCAGCAGCAC TCCTCACTGC CGCACCAGCA CATGCCGCAG CAGGATGCAC GGTCGACTAC
AGCATCGCTA GTCAATGGCC CGGTGGCTTC CAGGGGGCAG TCACCGTGAC AAACACGGGC
GACCCCATCA ACTCCTGGGA AATTACCTGG AACGAACCAG CCGGCCAAAG CATCGCCCAG
GCGTGGAACG CCACGGTCTC CCAAACCGGA AACACCGTGA CAGCAGGTAA CGTCTCCTGG
AACGGCGCGC TTGGTACCAA CGGAAGCACA AGCTTCGGAT TCATCGGTCA AGGTTCCTCC
CCCACAGCCC CCACCGCCTT CACGCTCAAC GGCGTCGCGT GTTCCGTGGA CGGCTCCCCA
GTCACACCAC CAGACCCCGA GCCAACCGAC CCAACCGACC CAGTCGACCC AGACCCAGAC
CCCACCGACG AGCCAGCCCC AAACCCCAGT GCACTATTCC TCGACACTGA CACCCAGGCC
TACGAGGCAT GGCAAGCCGC AAGCGGATCT GACAAAGACC TTCTGGCAAA AATTGCCCTC
ACCCCCGCAG CACGATGGAT TGGCGACTGG GACTCCAACT CAGAAGTCAC TGAAAAAGTT
CGCCAACTCA CCACTGACGC ACACGAAGCC GGGAAAAAGG CAGCCTTCGT GGCGTACGCA
ATCCCCGGAC GTGACTGTGG CAACCACTCC TCAGGAGGGG TAGCCACCAG CGAATACGCC
AACTGGATCA ACGCTGTTGC CCAAGGGATC GTGGGGAACC CCCTCATTGT GCTCGAGCCC
GACGCGCTCC CCCAACTCGG TGACTGCGAT GGCCAAGGCG ACCGCGCTGG ATACCTCGCC
TACGCAGCAC AAACACTGAC AAACGCAGGT GCAGAGGTTT ACATCGACGC CGGAAACAGC
GGCTGGAAAA CAGCAGAAGT CATGGCAGAA CGCCTCCAGC AAGCAGGAAT CGAACACGCT
GCAGGGTTCT CCCTCAACGT CTCGAACTAC CACACCACCG CAGACTCCGT TGCCTACGGA
CAGCGCATCT CCGATCTCAT CGGAGGGAAA AAGTTCGTTG TTGACACCTC ACGCAACGGC
AACGGATCCA ACGGCGAATG GTGCAACCCC TCCGGACGTG CACTCGGTGA ACAACCATCA
CTGAATGCTT CGGGTGCCCA CCGCGGAAAC TTGTGGATCA AACTGCCCGG CGAATCTGAC
GGTTCCTGCA ACGGTGGCCC CGCAGCAGGT CAATGGTGGC AGGCAGGCGC ACTAGAACTC
GCACGTAACG CCAAGTGGTA A
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| Protein sequence | MRQRTTSLLT TAALVGAGLI PAALLTAAPA HAAAGCTVDY SIASQWPGGF QGAVTVTNTG
DPINSWEITW NEPAGQSIAQ AWNATVSQTG NTVTAGNVSW NGALGTNGST SFGFIGQGSS
PTAPTAFTLN GVACSVDGSP VTPPDPEPTD PTDPVDPDPD PTDEPAPNPS ALFLDTDTQA
YEAWQAASGS DKDLLAKIAL TPAARWIGDW DSNSEVTEKV RQLTTDAHEA GKKAAFVAYA
IPGRDCGNHS SGGVATSEYA NWINAVAQGI VGNPLIVLEP DALPQLGDCD GQGDRAGYLA
YAAQTLTNAG AEVYIDAGNS GWKTAEVMAE RLQQAGIEHA AGFSLNVSNY HTTADSVAYG
QRISDLIGGK KFVVDTSRNG NGSNGEWCNP SGRALGEQPS LNASGAHRGN LWIKLPGESD
GSCNGGPAAG QWWQAGALEL ARNAKW
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