Gene Jden_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0532 
Symbol 
ID8379717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand+ 
Start bp574627 
End bp575250 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID645003264 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003160499 
Protein GI256831772 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0875801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0277044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CATACAGTGA CGACATGACC ACCCAACCGC GACGACAAAC GCGTGGAACA 
GCCCGTCGAG ACACAATCAT CGACGCTGCC CGCAGCCTCA TCACCCAGCA CGGGCCCTCC 
TACCTCACCC ACAGACGAGT CGCAGACACC GCTGGGGTGC CACTCGCGGC AACCACCTAC 
TACTTCACCT CCCTCGTCGA CCTCCTCGCC GCCGCCGGTG AACGCATGTG GTCATCGTGG 
ACCACCCACA CAGTCACCTG CGTCACCCAA GCACTTATGA ACCCGCCACA CACACCAGAC 
GAATACAGCG CAGTGATCGT CGATGCGATC CTCCCCCCAG GCGACGACAC CGCCCTGCGA 
GGCCACTACG AACACCTCAT CAGCCAAGGA CGCAACCACG CCTCCACCCC CACCCTGGAT 
GCCTACCGGG CCACACATCG ACAAGCAGTC GACACCCTCA TCACCGCGCT AGGCCTCCCA 
CTCACCGCCG ACACCGTGAT CGCCTGTGTC GAAGGCGCAG CCCTCCGCTC CCTGGGAAAC 
CACGACACCC CCCGCGAGAC CGCACGCCAC CAACTCACCC TCCTGCTTGA CGCAGCCACC 
CCCGCCCACG CCATTCCCGC ATAA
 
Protein sequence
MSGTYSDDMT TQPRRQTRGT ARRDTIIDAA RSLITQHGPS YLTHRRVADT AGVPLAATTY 
YFTSLVDLLA AAGERMWSSW TTHTVTCVTQ ALMNPPHTPD EYSAVIVDAI LPPGDDTALR 
GHYEHLISQG RNHASTPTLD AYRATHRQAV DTLITALGLP LTADTVIACV EGAALRSLGN 
HDTPRETARH QLTLLLDAAT PAHAIPA