| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0519 |
|---|
| Symbol | |
|---|
| ID | 8379704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 564006 |
|---|
| End bp | 564491 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645003251 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_003160486 |
|---|
| Protein GI | 256831759 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000993982 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00277743 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG AGACCACAGA GTTCACCAAC TGGCTCACAC CAGAACAGCA GCAGCACTGG
CGGCGTTACC TCGAGGGTAA TGCTCGGCTC TGGGATGCAC TCGCGCGAGA CCTCGAATCA
GCGACCCAAC TATCGCTCAG CGAGTACGAA ATTCTCGTGC GCCTATCCGA GCGAGACCTG
CGCACCATGC GGATGTCCGA ACTCGCCCAG GAACTGGCTC AGTCGCGCTC GCGGATCACC
CACACTGTCC GCAGGCTGGA GGGGAGAGGG CTGGTCTATC GGGCGCACAC TCCACGCGAT
GGGCGAGGGG TGAACTGCGT CATGACCAGA CTTGGGCATG ACGTGTTGCG CAGAGCTGCC
CCCATTCACG TGGCCTCAGT TCGTGCCCGC CTCATCGATG TGATCAGTGA CGAAGAGTTG
GCTGTCCTGG GGGCAGTTTT CGAACGGTTG GTCCAGGTTG TGTCAGATGA AAGTCACGAG
GACTGA
|
|---|
| Protein sequence | MSAETTEFTN WLTPEQQQHW RRYLEGNARL WDALARDLES ATQLSLSEYE ILVRLSERDL
RTMRMSELAQ ELAQSRSRIT HTVRRLEGRG LVYRAHTPRD GRGVNCVMTR LGHDVLRRAA
PIHVASVRAR LIDVISDEEL AVLGAVFERL VQVVSDESHE D
|
|---|
| |