| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0516 |
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| Symbol | |
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| ID | 8379701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 561694 |
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| End bp | 562794 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003248 |
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| Product | Arabinan endo-1,5-alpha-L-arabinosidase |
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| Protein accession | YP_003160483 |
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| Protein GI | 256831756 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000112186 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000226611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCGTAGTT CTCAGGTAGC TGCGGTTGCG GTTGTGATCG CTGTCGCCGT CACGAGCGGG
TGTGCTCCCA CTGCACCGTA CGCGGTGCAG TGGGAGCCTT CGGGGTCCGT GGACACCCAT
GATCCTGCTC TCATTATTGA CGATGGCGGG ACAACGGACA CCATCGATGA TGTGTGGTAC
GTGTATTCCA CGGGAAATGG TGCTGTGGGC TTAGGGTCAC CGCAAGTGCG TCAGTCTACC
GATCAGGGCA AGACGTGGGA TGAGGTGGGT CCCGCGTGGC GTGCTGAGGA TGAACCGTAC
TGGGCGCGGG AACTGATTTC GGGTGTGGAT AATTTTTGGG CACCAGAGGT AGTCGCGCAT
GACGGTGTGT ATTACATGTA CTACTCGGCG TCGACTTTCG GGTCGAATAC CTCACTTATT
GGGTTGTACA CGAACACAAC CTTGGACCCT GATGATCCTG AGTATCGGTG GGAGGATCAG
GGTGAGGTAG TGCGGTCAAC GGGTTCGTCA CCGTTTAATG CGATTGACCC CGGGGTGATT
ACCGATGCGC ACGGTGAGCC GTGGATGGTG TTTGGGTCCT TCTGGGAAGG GCTCTTTATG
GTCCCCTTGG AGTGGCCGTC GGGCAAGCTT CCTGGACAAG CAGGTGTCAC TGACGATCCG
CTGGGCAGTT CTGGGGTAGA ACCGGTCCAG GTTGCTGATC GCGGGTATGC CCCCAATGCG
ATTGAGGCCG GGTTCCTTTA TGAGCGGGAG GGGTGGTATT ACCTGTTCTT CTCCCGTGAT
TCATGTTGCC AGGGGACTGA TTCGACCTAC AACATGGCGG TGGGGCGCTC GCGTGACATC
ACAGGCCCTT ATGTTGACGA TGCAGGGGTT GCGTTGACTG AGGACGGAGG CCGCCCGTTG
CTGGGTACCG TGGGGACCAT GATTGGGCCT GGGGGCCAGT CTGTTGCTCG GGTAGGAAAC
AAGGATGTCC TGGCGTTTCA CTATTATGAC AAGGACTTGG GGGGAATGTT CCAGTTAGGT
TTGCGTGAGC TTGCGTGGAC CGACGATGGG TGGCCGATTG TGACCACACC GCAGGACGAG
GAGTTATTGC CCGAAGGGTG A
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| Protein sequence | MRSSQVAAVA VVIAVAVTSG CAPTAPYAVQ WEPSGSVDTH DPALIIDDGG TTDTIDDVWY
VYSTGNGAVG LGSPQVRQST DQGKTWDEVG PAWRAEDEPY WARELISGVD NFWAPEVVAH
DGVYYMYYSA STFGSNTSLI GLYTNTTLDP DDPEYRWEDQ GEVVRSTGSS PFNAIDPGVI
TDAHGEPWMV FGSFWEGLFM VPLEWPSGKL PGQAGVTDDP LGSSGVEPVQ VADRGYAPNA
IEAGFLYERE GWYYLFFSRD SCCQGTDSTY NMAVGRSRDI TGPYVDDAGV ALTEDGGRPL
LGTVGTMIGP GGQSVARVGN KDVLAFHYYD KDLGGMFQLG LRELAWTDDG WPIVTTPQDE
ELLPEG
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