Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0514 |
Symbol | |
ID | 8379699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 558803 |
End bp | 560110 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003246 |
Product | glycoside hydrolase, clan GH-D |
Protein accession | YP_003160481 |
Protein GI | 256831754 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000226064 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000231347 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTCCAT CGCACCCACC CATGGGATGG AACTCCTGGG ACTGCTTCGG GACAACCGTC ACCGAACATG AGCTCCTCGC CAACGCAGAG GTCATGGCTG CCCGGTTGTT GCCATCAGGA TGGAACACGA TCGTGTGCGA CATCCAATGG TACGAGCCTG CAGCCAAAGC CGGCGGATAC AATGACAACG CCGACCTCCA CCTCGATAGC TACGGTCGTC CACTGCCTGT TCCCCAACGA TTCCCCTCCG CCACAACCAT CAATGGCACT CCCACAGGAT TCACCCACAT CGCCCACAGC ATTCACGCCA AAGGGCTTGC CTTTGGTGTC CACCTCATGC GTGGAATCCC ACGGCAGGCG GTGACCAACA ACCTGCCCAT CGCCCACTCG TCGCACTATG CTGGCGACGT CGCTGACACC ACCTCCACGT GCCCATGGAA CACAGACAAC TACGGGGTCA ACCCCGAACA TCCGGGCGCA CAAGATTGGT ATGACGCACT CATCGACCAA CTCGCGAGCT GGGGAATCGA CTTCCTCAAA ATCGACGACA TGCTCGCCCC CTACCACGCC AGCGAGATCG AACTCGTCCA CCGAGCCATC GCCCGTGCTG AACACCGCCA CAACCGAACA ATCACGCTGT CCCTGTCGCC CGGAACACGG GTCTCACTGA CCCGACGAGA TCACCTTGCC GCCCACGCAA CAATGTGGCG CATCAGCGAT GACCTGTGGG ACCGGTGGGA GGACATCACC GCCCAAATCG ACCGCCTCGC CCTGTGGGCG CCCCACCAAA CACCAGGAGC GTGGGCGGAC GCGGACATGT TGCCACTGGG ACGCATCGGC GTGAGAGCAG AACGAGGCCA ACCCCGCAAC AGCGCCTTGA CCATCACCGA GCAACGGACC CTCATGTCCG CATGGACACT GGCTCAGTCG CCTCTCATGA TGGGCGGTGA TCTTGCCACG AGTAGTGATG TCACCTTCGA GCTCCTCACC AACAGTGCGG TTCTTGAGCA CTACCGCCAA GGCATTGCAG CGCACTGCAT CCTTGCTGAA GGAAAAACCC GGGTGTGGCT CACCCCTGCC CACGCGCCCA CGCGCCACGT CGCAGTGATG AACCTCGATG ACACTGCACG CACCCATATC ATCGACCTTG ATGACATTGC CGCCCCCCAC ACAACAAGCG CGACAGATGT GTGGACCGGA CGCCACTATG CCGTCACCAC GGACACTGCG ACGCACCCCT ACCGGCACAT CGCAGTGACT GTACCCGCCC ACGGTGTCGC CCACTTGGCG CTCACCAGTT CGCACTAA
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Protein sequence | MRPSHPPMGW NSWDCFGTTV TEHELLANAE VMAARLLPSG WNTIVCDIQW YEPAAKAGGY NDNADLHLDS YGRPLPVPQR FPSATTINGT PTGFTHIAHS IHAKGLAFGV HLMRGIPRQA VTNNLPIAHS SHYAGDVADT TSTCPWNTDN YGVNPEHPGA QDWYDALIDQ LASWGIDFLK IDDMLAPYHA SEIELVHRAI ARAEHRHNRT ITLSLSPGTR VSLTRRDHLA AHATMWRISD DLWDRWEDIT AQIDRLALWA PHQTPGAWAD ADMLPLGRIG VRAERGQPRN SALTITEQRT LMSAWTLAQS PLMMGGDLAT SSDVTFELLT NSAVLEHYRQ GIAAHCILAE GKTRVWLTPA HAPTRHVAVM NLDDTARTHI IDLDDIAAPH TTSATDVWTG RHYAVTTDTA THPYRHIAVT VPAHGVAHLA LTSSH
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