| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0502 |
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| Symbol | |
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| ID | 8379687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 543993 |
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| End bp | 545138 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003234 |
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| Product | ABC transporter sugar-binding protein |
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| Protein accession | YP_003160469 |
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| Protein GI | 256831742 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.445823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.255997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCA GGAAGTTTGC TGCGATCGCA GCAGGACTCA CACTGACCCT CGGTCTCGCG
GCCTGTGGCG GCGAAGGCGC TGGCAGCGGA GATGACAACA ACGGCGGCGC AGCAAACGGT
GAACCAAGTG ACCTCACCGT TGGTGTTGCC ATGCCAACCC AAACCTCAGA ACGCTGGATC
GCTGACGGCG CAGCCGTCGA AGACAGCCTG AAGGAACTGG GCTACAACGT GGACCTCCAG
TTCGCAAACG ACCAGATCCC CACCCAGCAG CAACAAATCG ACCAGATGGT CACCCAGGGT
GTCGACGCAC TTATCATCGC ATCGATCGAC GGAACCGCAC TGTCCACCCA GCTCGACGCT
GCTGGCGCTG CAGGTATCCC CGTCATCGCC TATGACCGTC TGATCAACGG AAACGAAAAC
GTTGACTTCT ACGTGACCTT CGACAACGAG AACGTCGGTG TCCAGCAGGC CACCTCACTC
CTCGTGGGTC TCGGCATTCT CAACGCTGAC GGTTCCGAAG GTGACGCTGA AGGACCCTTC
AACGTCGAGC TGTTCGCAGG TTCCCCAGAT GACAACAACG CAACGTTCTT CTTCAACGGT
GCAATGAAGA CCCTTGAGCC GTACATCGAA GACGGCACAC TGGTCGTCAA GTCTGGGCAG
ACCGACTTTG GTACCGTCGC AACCCAGCGT TGGAGCCAAG AAGAAGCCCA GAAGCGTATG
GAAAACCTCC TCACCTCCAC CTACCAGGGA AGTGACAAGG TTGATGGTGT TCTCTCACCA
TTCGACGGAA TCTCCCGCGG GATCATCTCC GCACTTGAAG GTGCCGGATA CTCCGGTGAC
GACATGCCCA TCATCACCGG CCAGGACGCA GAAATCGCCT CAGTGAAACT CATCAACGAT
GGCGTCCAGT TTTCCACCAT CTTTAAGGAC ACCCGTAAGC TCGCTGACCA GGCAGTGTCA
GCAGCTCAGA CCTACCTCGA AGGTGGAACC CCAGAGCCTA ACGACACCGA TAGCTACAAC
AACGGTGTGA AGAACGTTCC GTCGTTCCTC CTGGAATCAG ACATCGTCTA CAAGGACAAC
ATCACCTCCC TCCTTGTTGA CTCGGGCTAC TACACCCAAG AACAAGTCGA CTCAGGCCAG
GCCTAA
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| Protein sequence | MISRKFAAIA AGLTLTLGLA ACGGEGAGSG DDNNGGAANG EPSDLTVGVA MPTQTSERWI
ADGAAVEDSL KELGYNVDLQ FANDQIPTQQ QQIDQMVTQG VDALIIASID GTALSTQLDA
AGAAGIPVIA YDRLINGNEN VDFYVTFDNE NVGVQQATSL LVGLGILNAD GSEGDAEGPF
NVELFAGSPD DNNATFFFNG AMKTLEPYIE DGTLVVKSGQ TDFGTVATQR WSQEEAQKRM
ENLLTSTYQG SDKVDGVLSP FDGISRGIIS ALEGAGYSGD DMPIITGQDA EIASVKLIND
GVQFSTIFKD TRKLADQAVS AAQTYLEGGT PEPNDTDSYN NGVKNVPSFL LESDIVYKDN
ITSLLVDSGY YTQEQVDSGQ A
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