| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0497 |
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| Symbol | |
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| ID | 8379682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 538132 |
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| End bp | 538860 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003229 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_003160464 |
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| Protein GI | 256831737 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.591725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAATC ACGAGCAGGA ATCCCCACGC AATGTCCCCT CGGCACGCGG ACTTGAGGGA
TACTCACAAG AAGTCCTCGA CGAAATCGCT GAGGTTCGTC GCATCGTCTC CACGCTGCAC
GCCGAACTGC CCAAATGGGA ACTTGTTGTG TGGACCGCAG GGAACGTGTC CCAACGCCTC
AAGAGTGCTG ACCTTCTCGT TATCAAACCA TCCGGTGTCA CCTACGACGA GCTCACGCCC
GAAAAAATGG TTGTCTGTGA CCTTGATGGC AACCTCGTGG ACGGGGACAA AGCACCGTCC
TCAGACACTG CAGCGCACGC CTACGTGTAC CGCAACATGC CAGGAGTGTA CGGGGTTGTG
CACACGCACT CGACTTACGC CACCGCATGG GCTGCCCGTG CCGAACCCAT CCCGTGTGTA
CTCACCATGA TGGCTGACGA GTTCGGTGGT GACATCCCCG TTGGTCCCTT TGCGCTCATT
GGAGATGACT CCATTGGACA AGGCATCGTC GACACCCTGC GTGAGTCACG CTCACGGGCA
GTCCTCATGC GCAACCACGG ACCTTTCACC ATCGGGAAAG ACGCCAAAGA TGCAGTCAAG
GCAGCCGTCA TGGTGGAGGA AGTTGCCCGC ACCGTCCACA TCTCTCGGCA ACTGGGCGAA
CCTGGCCGGA TTGGCCAAGA CGACATTGAC CGACTCTTTG ACCGCTACCA AAACGTGTAC
GGCCAGTAA
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| Protein sequence | MFNHEQESPR NVPSARGLEG YSQEVLDEIA EVRRIVSTLH AELPKWELVV WTAGNVSQRL
KSADLLVIKP SGVTYDELTP EKMVVCDLDG NLVDGDKAPS SDTAAHAYVY RNMPGVYGVV
HTHSTYATAW AARAEPIPCV LTMMADEFGG DIPVGPFALI GDDSIGQGIV DTLRESRSRA
VLMRNHGPFT IGKDAKDAVK AAVMVEEVAR TVHISRQLGE PGRIGQDDID RLFDRYQNVY
GQ
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