| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0493 |
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| Symbol | |
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| ID | 8379678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 533154 |
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| End bp | 534515 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645003225 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_003160460 |
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| Protein GI | 256831733 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.119863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCAG CAGCAAAAAA ACAACGCACC AGCCACACCT GTTCCGCCTG CGGGTGGAGC
ACCGGCAAAT GGGTTGGCCG GTGCACCCAG TGCGGCGAAT GGGGCACCCT CACCGAAACA
TCCGCGGTCT CCGGCCCCCG GACCACCGCA ACGACACTGA CCACACCAGC CACCCCCATC
TCCCACATTG ACGCACACAT CACCCAAGCC CGACCAACCG GGATTGATGA ATTCGACCGA
GTCCTCGGCG GAGGGCTGGT CCCCGGCGCA GTCATCCTCC TCGCCGGGGA ACCCGGGGTA
GGAAAATCCA CCTTACTTCT CGACGTGGCT GCAACCACCG CACGCAGCGG CCGCACAGTC
CTCTACGTCA CCGCCGAGGA ATCCGCAGGT CAAGTCCGTT TACGCGCCGA ACGGATCGGC
GCACTTGACG ACAACCTCTA CCTCGCCTCC GAAGTCGACC TGGGACAAGT ACTCGCCCAC
GTCAACGCGG TCACACCAGA CCTGCTCATC GTGGACTCCG TGCAAACGAT CGCCTCCACC
CAAGTGGACG GCGCAGCAGG AGGTGTCGCC CAAGTCAAAG AAGTCGCCTC CGCCGTGATC
TCCGTAGCCA AAGAACGCGC AATCCCCACC ATTGTCGTAG GACACGTCAC CAAAGACGGG
TCCGTGGCAG GACCACGAAC CCTGGAACAC CTTGTCGATG TGGTCTGCCA GTTCGAAGGA
GACCGTCATT CACGGTTACG CATGGTCCGC GCTGTGAAAA ACCGGTACGG TCCCACCGAT
GAGGTCGGGT GCTTTGACCT CAGCGAAACC GGAATAGTCG GGTTGGCTGA TCCCTCGGGG
TTATTCCTTT CGCAGGTCAA CATGCTCGTC GCAGGAACCT GCATCACTGT GACCCTTGAG
GGGCGCCGCC CACTGGCGCT AGAAGTCCAG TCCCTTGTGG TCCCCAGCCC ACTGACCAAC
CCCCGCCGCA CCACCAGTGG AGTTGATTCC TCACGTCTGG CGATGATCCT GGCGGTTGCC
CACCGCCACC TGGGGGCACG CCTCATGGAC GCCGACATTT ACGTGTCCAC GGTTGGGGGC
GCAAAAATGA CTGAACCAGC AGTAGACCTC GCCATGCTCC TAGCAACAAT GAGCGCCGTT
GAGGACCGTC CCTTACCAGT GGGAACTATT GCTCTGGGTG AAGTTGGTCT GGCCGGAGAG
ATCCGGTCCG TCACTGGTCT GGCCCGTCGC CTCCAGGAAG CGGCACGCCT TGGTTTCACC
CGGGCCATCA TCCCTGCCAG CACGAATACA CCCGCAGTTG CCGGGATCAC CACGTTGGAA
GCAACCACAG TGCGCGATGC GCTCGCACAC GCATACGAGT GA
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| Protein sequence | MPPAAKKQRT SHTCSACGWS TGKWVGRCTQ CGEWGTLTET SAVSGPRTTA TTLTTPATPI
SHIDAHITQA RPTGIDEFDR VLGGGLVPGA VILLAGEPGV GKSTLLLDVA ATTARSGRTV
LYVTAEESAG QVRLRAERIG ALDDNLYLAS EVDLGQVLAH VNAVTPDLLI VDSVQTIAST
QVDGAAGGVA QVKEVASAVI SVAKERAIPT IVVGHVTKDG SVAGPRTLEH LVDVVCQFEG
DRHSRLRMVR AVKNRYGPTD EVGCFDLSET GIVGLADPSG LFLSQVNMLV AGTCITVTLE
GRRPLALEVQ SLVVPSPLTN PRRTTSGVDS SRLAMILAVA HRHLGARLMD ADIYVSTVGG
AKMTEPAVDL AMLLATMSAV EDRPLPVGTI ALGEVGLAGE IRSVTGLARR LQEAARLGFT
RAIIPASTNT PAVAGITTLE ATTVRDALAH AYE
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