| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0490 |
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| Symbol | |
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| ID | 8379675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 530168 |
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| End bp | 531103 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645003222 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_003160457 |
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| Protein GI | 256831730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.270588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCAG CACCACACAC CACACCACCG CATGTTGACG AAGTTCACGC CCAGTTGTCT
GCGTGGTTCG ACGGCGCTGA ACGCGATCTG CCGTGGCGGC GCCCAGGCAC AACACCGTGG
GGGGTTTTGG TCAGTGAGGT GATGTCCCAA CAAACCCCCG TGGCACGTGT TGCTCCCAGG
TGGGAGCGAT GGATGACGAT GTGGCCCACG CCCGCCCACA TGGCTGCTGC ATCTCGTGAT
GTGGTCCTCA CCGAGTGGGG AACGTTGGGT TACCCGCGTC GTGCACTGCG CTTGCACGAA
TGTGCTCGTG TCATCACCGA ACGTCACCAC GGTGAAGTTC CCGCTACGGA GGAAGAGCTG
CGTGCACTGC CAGGGATTGG TTCCTACACG GCGGCCGCTA TTGTGGCGTT TGCCTTTCAC
CGGCGTGCAG TGGTTCTTGA CACCAACGTG CGTCGGGTGA TTGCGCGAGT GTTTGCAGGG
GTTGCTCTTC CGCCGCCGTC GCCCCGGCGC CATGAGTGGG AGCTAGCCGA TGCGCTCGCC
CCGCTAGCAG ACCAGGACGC CGCACGGTGG GCGGTTGCGT CCATGGAGTT TGGTTCGTTG
GTGTGCACAG CTCGGACACC TCGGTGTGAC CAATGCCCGA TCGCGCACCT GTGCGGGTGG
CGGGAGGCAG GCTATCCCGA TGACGAGCAC GCGCCCATTC GTCGTCCGCA ACGCTTTGCC
GGCACGAACC GGCAGGTGCG TGGCATCATC ATGGCTCACC TGCGAGCGCA TCGGTGTGCG
AGTCGTGATG AGGTTGCTGG TTTGTGGGTT GCGGACCCCG AGCAGTTGTC CGCGTGTGTG
GAGTCGTTGG TGGCGGATGG TTTGGTGGAA GAAACGGCAG GTGTCTTCCA TCTTCCTGAT
GTGGTGGTGG CTACGGGTGG GGTGGGTGCT CGTTGA
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| Protein sequence | MPPAPHTTPP HVDEVHAQLS AWFDGAERDL PWRRPGTTPW GVLVSEVMSQ QTPVARVAPR
WERWMTMWPT PAHMAAASRD VVLTEWGTLG YPRRALRLHE CARVITERHH GEVPATEEEL
RALPGIGSYT AAAIVAFAFH RRAVVLDTNV RRVIARVFAG VALPPPSPRR HEWELADALA
PLADQDAARW AVASMEFGSL VCTARTPRCD QCPIAHLCGW REAGYPDDEH APIRRPQRFA
GTNRQVRGII MAHLRAHRCA SRDEVAGLWV ADPEQLSACV ESLVADGLVE ETAGVFHLPD
VVVATGGVGA R
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