Gene Jden_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0474 
Symbol 
ID8379659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp509813 
End bp510457 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID645003206 
Producthypothetical protein 
Protein accessionYP_003160441 
Protein GI256831714 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.84085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGGCG GCCACGGAAA AATCGCCATG CTTCTTCATC CGATTCTTGT TGCTGCCGGG 
CACCAACCAG TTGCGTTGGC GCGCAGTGAA GAGTACCGAT CCGACCTGGA TCGGGTGGGC
GCCCAGTTGC GTCTGTTAGA TATTGAGAAC AGTCAGGTTG AGGACTATGT GGCAGCTTTC
GCTGGGTGCG ATGCGGTGGT GTTTGCTGCT GGTGGTGGTC CTGATGGGAA CAAGGACCGT
AAGAAGACCG TCGACCTTGG CGGGTCGCTC GCTTCCATTG ACGCCGCTCA ACGGGCAGGT
GTGCGGCGTT TTGTACAAAT CTCGGCGATG GGTGTTGATG AACCACTTCC TGAGGACACC
GGCGATGTGT GGGCTGCCTA CGTTGAGGCG AAGCGTGACG CCGACACAGC GTTGCGTGAC
AGTGGATTGC AGTGGACGAT CATTCGCCCC GGTGCGCTCA CGGATGAGGC CGCAACGGGC
GCAGTGACGG TGGGGGACAC AGTTGATCGT GGGGAGATCA CTCGCGCGGA CGTCGCTGCT
CTTGTTGCTG CTGCTCTTGC CACAGATTCA ACGATTGGCA CCCAGTGGGA GGCAATTAAT
GGGGACACCC CCATTGGCGA TGCTGTGCGC GGAATCTCCG CGTAG
 
Protein sequence
MVGGHGKIAM LLHPILVAAG HQPVALARSE EYRSDLDRVG AQLRLLDIEN SQVEDYVAAF 
AGCDAVVFAA GGGPDGNKDR KKTVDLGGSL ASIDAAQRAG VRRFVQISAM GVDEPLPEDT
GDVWAAYVEA KRDADTALRD SGLQWTIIRP GALTDEAATG AVTVGDTVDR GEITRADVAA
LVAAALATDS TIGTQWEAIN GDTPIGDAVR GISA